Gene Krad_4501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_4501 
Symbol 
ID5337794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp2329865 
End bp2330467 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content80% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_001364224 
Protein GI152968440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00313131 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0290661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCGG CGGGCCCCGG CGCGCCGGTG GACCCGCGCA GCGACGCGGA GCTCCTCGCC 
GCGCACGTGG CGGGGGACCC GGAGGCGTTC GGGGAGGTCG TGCGCCGCCA CCGCGACCGG
CTGTGGGCGG TGGCGCTGCG CACCACGGGC GACCGGGAGG AGGCCGCCGA CGCCCTCCAG
GACGCCCTCG TCTCGGCGCT GCGGGCCGCC GGCCGCTTCC GCGGCGAGTC CGCGGTCACG
ACGTGGCTGC ACCGCATCGT CGTCAACGCC TGCCTGGACC GGGCCCGGCG CCGGGCGGTG
CGCCCCACGC GCCCCCTGGA GGAGGAGGTC GGTCCCGGCG GGGAGGAGAG CGCCCGCACC
GGGGCCGCCC TGGCCGTCGC CGAGGACGCC ACCCCGCACG TGGAGACGGC CCTCGACGTG
ACCAGCGCCC TGGCGCGGCT GCCGGAGGCG CAGCGGGCGG CGCTGGTGCT CGTCGACATG
TACGACGTGC CGGTCGCCGA GGCCGCCGCG ATCCTCGACG TCGCAGTGGG CACGGTGAAG
TCCCGCTGCT CGCGCGGGCG GGCGGCGCTG GCGGAGCTCC TCGGCGGGCC GGGGAACCGT
TGA
 
Protein sequence
MTPAGPGAPV DPRSDAELLA AHVAGDPEAF GEVVRRHRDR LWAVALRTTG DREEAADALQ 
DALVSALRAA GRFRGESAVT TWLHRIVVNA CLDRARRRAV RPTRPLEEEV GPGGEESART
GAALAVAEDA TPHVETALDV TSALARLPEA QRAALVLVDM YDVPVAEAAA ILDVAVGTVK
SRCSRGRAAL AELLGGPGNR