Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_4319 |
Symbol | rumB |
ID | 5336548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 2558125 |
End bp | 2559243 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | 23S rRNA methyluridine methyltransferase |
Protein accession | YP_001364046 |
Protein GI | 152968262 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.255085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGTGCG ACTACTACGA CGCCCGCGCG TGCCGTTCGT GCACCCTCAT CGAGCTCCCC TACCCCCGGC AGGTCCGGGA CAAGGAGGAG CGCTGCCGCG AGCTGCTCGC CGCCCACGAG GGCCTGCGCT GGCTGCCGAG CGTCCGCAGC CCCGAGGCGG GGTACCGCAA CAAGGCCAAG ATGGTCGTCG GCGGCACGGT GGAGCGGCCC ACGTTCGGCA TCCTGGACGC CGCCGGCCGC GGGGTCGACC TCAGCGAGTG CCCGGTCTGC GCGCCCGGCA TCCTCGACCT CCTGCCCGTC CTGGCCCGCT TCACCACCCG GGCCGGGCTG GTGCCCTACG ACGTCCCGCG CCGGCGCGGT GAGCTGAAGA ACGTCCTGAT CACCGAGTCC CCCTCGGGGG AGCTCATGGT CCGCTTCGTC CTGCGCTCGC AGGACCGCCT GCCCGCGCTG CGCCGGCACC TGCCGCAGCT GCTGCGCGAG GCCCCGCGCC TGGCCGTCGT CAGCGTCAAC CTGCTCCCCG AGCACAAGGC CGTCGTCGAG GGCGACGTCG AGATCGCCCT CACCGAGCGC ACGACGCTGC GGATGCCGAT GGGCGGGGTC GACCTCGACC TGCGTCCGCA GAGCTTCTTC CAGACCAACA CCGTCGTCGC GCGGGAGCTG TACGCCCAGG TCGCCCGCTG GGTCGACGAG GTCGCCCCGG CCAGCCTGTG GGACCTCTAC TGCGGGGTCG GCGGCTTCGC CCTGCACTGC GCGGCCCCGG GCCGCCGCGT CACCGGCATC GAGGTGAGCG CGGAGGCCGT CGAGAGCGCC CGCGCCGCCG CCGCCGGCCT GCCCGACGTG GAGTTCGCCG CCGGCGACGC GACCCGGTTC GCGCTGGAGG CGCCCGAGGC GCCGGAGCTG GTCGTGGTGA ACCCCCCGCG CCGCGGGATC GGCCCGGAGC TCAGCGGGTG GCTGGAGCGC TCCGACGTCG CCCACGTCGT GTACTCCAGC TGCAACCCCG TCACGCTGGC CAAGGACCTC GCGGCCATGC CGTCGCTGCG GCCGGTGCGG GCCCGGGTGC TCGACATGTT CCCCCACACC CAGCACGTCG AGGTCGCGGT CCTGCTCTCC CGGACCTGA
|
Protein sequence | MQCDYYDARA CRSCTLIELP YPRQVRDKEE RCRELLAAHE GLRWLPSVRS PEAGYRNKAK MVVGGTVERP TFGILDAAGR GVDLSECPVC APGILDLLPV LARFTTRAGL VPYDVPRRRG ELKNVLITES PSGELMVRFV LRSQDRLPAL RRHLPQLLRE APRLAVVSVN LLPEHKAVVE GDVEIALTER TTLRMPMGGV DLDLRPQSFF QTNTVVAREL YAQVARWVDE VAPASLWDLY CGVGGFALHC AAPGRRVTGI EVSAEAVESA RAAAAGLPDV EFAAGDATRF ALEAPEAPEL VVVNPPRRGI GPELSGWLER SDVAHVVYSS CNPVTLAKDL AAMPSLRPVR ARVLDMFPHT QHVEVAVLLS RT
|
| |