| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4305 |
|---|
| Symbol | |
|---|
| ID | 5336399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 2571083 |
|---|
| End bp | 2573257 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent DNA helicase, RecQ family |
|---|
| Protein accession | YP_001364032 |
|---|
| Protein GI | 152968248 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.586353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.167588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGGGG CCGGTGGCAG AGTCCTCCCC GTGCCCGCCC CCACCGCCCC GCCCGACGCC
GCCCTCGACC GCACGGCCCT GCGCGCGGAG GCCGAGGAGG TCCTGCGCCG CCTCGTCGGG
GACCCGGGGG CGAGGTTGCG GGAGGACCAG TGGACGGCGA TCGAGGCCCT GGTCGCCGAC
CACCGCCGGG CGCTGGTCGT GCAGCGCACC GGCTGGGGCA AGTCGGCGGT GTACTTCGTC
GCGACGGCCC TGCTGCGCGC CCGCGGGGCG GGCCCCACGG TCATCGTGTC GCCGCTGCTG
GCGCTGATGC GCAACCAGGT CGCGGCCGCC GAGCGGGCCG GGGTGCGCGC GGTGACGGTG
AACTCCACCA ACGGCGAGGA CTGGGGCCGC GTCTACGACG AGGTGCGCGC CGGGGCCGTC
GACGTCCTGC TCGTCTCCCC CGAGCGCCTG AACAACCCCG GTTTCCGCGA CGAGGTGCTG
CCCCCGCTGG CCGCGACGAC CGGGCTGCTG GTCGTCGACG AGGCGCACTG CGTCTCCGAC
TGGGGCCACG ACTTCCGCCC GGACTACCGC CGCATCCGGA CGCTGCTGGC GGACCTGCCC
GACGGCATCC CCGTGCTCGC GACGACGGCG ACGGCGAACG AGCGGGTCAC CGCCGACGTC
GCCGAGCAGC TGTCGGTGAC GGGGACGCGG ACCCTCGAGG ACGTCCTCGT GCTGCGGGGC
TCCCTGGACC GGGAGTCGCT GCGGCTGGGC GTGGTGGGAG TGCCCACGCA CGCGCACCGG
CTCGCGTGGC TGGTGCAGCA CCTGCCGGAG CTGCCGGGCT CGGGGATCGT CTACGTCCTC
ACCGTCTCCG CGGCCGCCGA CGTCGCGAAC CACCTGCGCG CCCACGGCAT CGACGCCGTC
GCCTACACCG GCCAGACCGA CCCCGCCGAG CGCCTGCAGG CCGAGGACGA CCTGGTCAAC
GACCGCGTCA AGGCGCTCGT CGCGACGAGC GCCCTGGGGA TGGGCTTCGA CAAGCCGGAC
CTGGGTTTCG TCGTCCACCT GGGCGCGCCG AGCTCACCCA TCGCCTACTA CCAGCAGGTC
GGGCGCGCGG GCCGCGGGAT CGACGAGGCC GCGGTCGTCC TGCTGCCGGG GGCGGAGGAC
CGTGACATCT GGCGCTACTT CGCCTCGATC GGGTTCCCCG CCGAGGACGA CGTGCGGCTC
GCGCTGGGCG TCCTCACCGA CGCCGGTGAA CCGCTGTCCA CCCAGGCCCT GGAGACGCGG
GTCGCGCTGC GCCGCAACCG CCTGGAGATG ATGCTCAAGG TCCTCGACGT GGACGGCGCG
GTCCGGCGGG TCCGGGGCGG CTGGGTGGCG ACGGGGGCGG AGTGGGCCTA CGACGCGGAC
CGCTACGCCC GCGTCGCCCG GGCCCGCGAG GTCGAGCAGC AGGCGATGCT CGACTACGTC
GCGACGACGG GGTGCCGCCT GGAGTTCCTG CGCCGCGCCC TCGACGACCC CGAGGCCGCC
CCGTGCGGGC GCTGCGACAA CTGCGGGGGC TTCGCCGTCT CCGGCGACGT CGACGAGGCC
GCGGTGACGC GGGCCGGGGC CGACCTCGAC CGGCCCGGGG TCGCGCTGGA GCCGAAGAAG
CAGTGGCCGA CGGGGGTGAA GAGCCTGGGG GTCCCCGTCT CCGGCCGGAT CGCGCCGGCG
GAGCAGCCCG GCAGCGGCCG CGCGGTGGCC CGCACCACCG ACCTCGGCTG GGGCGGTGCG
GTCCGCGAGC TGTTCGCCCC CGGGGTGCCC GACGGCCCGA CCCCGGTCCC GCTGCGCCAC
GCGGCCGCCG CGGTCCTCGA CGACTGGGCC CGCGACCTCG CCCTGGACGG GATCGTGGCG
ATGTGCTCGG CGTCGCGCCC GCAGCTCGTC GCCCACCTCG CCGAGGGGTT GTCCCGCTAC
ACGGGGCTGC CCGTCCTGGC CACGTTCCGG TTGCTGGACG GTTCCCCCAC CCGCAGCGAC
GTGAACTCCG CGCACCGGTT GTCGCAGGTG GCCCGGCGCT TCGAGCTGCC CGAGGACGCG
CCGGTGGCCG GGCGGCGGGT CCTGCTCGTG GACGACCGCG CCCGCAGCGG CTGGACCCTG
GCCGTGGCCG CCCGCCAGCT GCGGCGCGCC GGTGCGGACG CGGTGCACCC CTTCGTCCTC
GGCGACGGGG AGTAG
|
|---|
| Protein sequence | MSGAGGRVLP VPAPTAPPDA ALDRTALRAE AEEVLRRLVG DPGARLREDQ WTAIEALVAD
HRRALVVQRT GWGKSAVYFV ATALLRARGA GPTVIVSPLL ALMRNQVAAA ERAGVRAVTV
NSTNGEDWGR VYDEVRAGAV DVLLVSPERL NNPGFRDEVL PPLAATTGLL VVDEAHCVSD
WGHDFRPDYR RIRTLLADLP DGIPVLATTA TANERVTADV AEQLSVTGTR TLEDVLVLRG
SLDRESLRLG VVGVPTHAHR LAWLVQHLPE LPGSGIVYVL TVSAAADVAN HLRAHGIDAV
AYTGQTDPAE RLQAEDDLVN DRVKALVATS ALGMGFDKPD LGFVVHLGAP SSPIAYYQQV
GRAGRGIDEA AVVLLPGAED RDIWRYFASI GFPAEDDVRL ALGVLTDAGE PLSTQALETR
VALRRNRLEM MLKVLDVDGA VRRVRGGWVA TGAEWAYDAD RYARVARARE VEQQAMLDYV
ATTGCRLEFL RRALDDPEAA PCGRCDNCGG FAVSGDVDEA AVTRAGADLD RPGVALEPKK
QWPTGVKSLG VPVSGRIAPA EQPGSGRAVA RTTDLGWGGA VRELFAPGVP DGPTPVPLRH
AAAAVLDDWA RDLALDGIVA MCSASRPQLV AHLAEGLSRY TGLPVLATFR LLDGSPTRSD
VNSAHRLSQV ARRFELPEDA PVAGRRVLLV DDRARSGWTL AVAARQLRRA GADAVHPFVL
GDGE
|
|---|
| |