| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4157 |
|---|
| Symbol | |
|---|
| ID | 5336037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 2724478 |
|---|
| End bp | 2725272 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_001363884 |
|---|
| Protein GI | 152968100 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.831007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCT TCCTCCTGGC GGTCTGCGCC GAGATGGTGT TCCGGGAGCT CCCGTTCGCC
GAGCGGGTCC GCACGCTGCA CGAGGCGGGT TTCGCGGTGG AGCTGTGGGA CTGGACGACG
AAGGACCTGC CGGAACTCGC CGCGACCGGC GCCCGGTTCA CCTCCATGAC CGGCTACGTC
GACGGTGAGC TCGTCGACCC CGACGGCGCG GAGCGGTTGC TCGCGAGCGC CGAGCGCTCC
ATCGCGGCGG CCGACCTCCT CAGCGGCGCC GGGCGGCCCA ACCTCAACCT GCACGGGACG
GGGCTGGACG GGCGGGGGTT GCCGGTCCGG CCCGTCACGG CGGTGACGGG GGCGATGTGG
ATCGCCGCCG AGCGCACGCT GCGCCGCGTC GCGGAACTCG GCGCCCGCCA CGGCGTGGTG
TTCACGCTGG AGAACCTCAA CGTCGCCGTC GACCACCCGG GGACGCCGTT CGCCTCCGCG
GCCGACACCC GCGCGCTCGT CGCGGCGGTG GCCAGCCCGC ACCTGCGGAT GAACCTGGAC
CTGTACCACG CCCAGATCGG GGAGGGGAAC CTCGTCGACC TGCTGCGCGG GTGCGTGGAC
CTGCTCGGCG AGGTGCAGGT CGCCGACGTC CCGGGGCGCT GCGAACCGGG GACCGGGGAG
GTGAACTACC CCGTCGTGGC CGCGGCGCTG CACGCGACGG GGTACCGGGG GACGGTGGGC
CTGGAGGCCT TCGCCTCCGG CGGCAGCCGG GAGGCCGTCG AGGCGTTCCG GCGGGCGTTC
ACCGTGGCCG GCTGA
|
|---|
| Protein sequence | MSGFLLAVCA EMVFRELPFA ERVRTLHEAG FAVELWDWTT KDLPELAATG ARFTSMTGYV
DGELVDPDGA ERLLASAERS IAAADLLSGA GRPNLNLHGT GLDGRGLPVR PVTAVTGAMW
IAAERTLRRV AELGARHGVV FTLENLNVAV DHPGTPFASA ADTRALVAAV ASPHLRMNLD
LYHAQIGEGN LVDLLRGCVD LLGEVQVADV PGRCEPGTGE VNYPVVAAAL HATGYRGTVG
LEAFASGGSR EAVEAFRRAF TVAG
|
|---|
| |