| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3961 |
|---|
| Symbol | |
|---|
| ID | 5337997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 2927295 |
|---|
| End bp | 2928758 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Beta-glucosidase |
|---|
| Protein accession | YP_001363688 |
|---|
| Protein GI | 152967904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000589535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCA CCGAAGAACG CTCCACCACC CCCGCTCCCA GCGCCGCCGA GCGCACCTTC
CCGCCCGGTT TCGTCTGGGG GACGGCCACC GCGTCCTACC AGGTCGAGGG GGCCGTCGCG
GAGGACGGGC GCACGCCCTC GATCTGGGAC ACCTTCAGCC ACACCCCCGG CCGCGTCGTG
GCCGGGGACA CCGGCGACGT CGCCGACGAC CACTACCACC GCTTCCGCGA GGACATCGCC
CTCATGAAGC GGCTGGGGAT GGCCTCCTAC CGGTTCTCCG TGGCCTGGCC GCGCATCACC
CCGCAGGTCA GCGCCGACGA GCTCGGCCCC GTCAACCCGG CCGGTCTGGC GTTCTACTCC
ACCCTCGTCG ACGAGCTGAT CGCCGCCGGG ATCGAACCCG CGGTCACCCT CTACCACTGG
GACCTGCCCC AGGCCCTGGA GGACGCCGGC GGGTGGACCG CGCGCACCAC CGCCGAGCGC
TTCGCGGAGT ACGCCGAGGT CGTGGCCGGG GCGCTCGGCG ACCGGGTGCG CACCTTCATC
ACCCTCAACG AGCCCTGGTG CTCGGCCTAC CTCGGCTACG CCTCCGGCGT GCACGCCCCC
GGGCGCACCG AACCCGCCTC CGCGCTGGCC GCGGTGCACC ACCTCAACCT CGCCCACGGC
CTCGGGGCCG CCGCCGTGCG CCGCGCCGCC CCCGGAGCGC GGGTGGCCCT GACCCTGAAC
CTGGCGTGGG TCCGCACCGA GGGCACGAGC GAGGCCGACG CCGACGCCGT GCGCCGCGTC
GACGGCCTGC AGAACCGGGT GTTCCTCGAC CCCGTGCTGC GCGGCACCTA CCCCGCCGAC
GTCCAGGCCG ACACCTCCTC GGTCACCGAC TGGTCCTTCG TGCGCGAGGG CGACCTCGCC
CTCATCCACC AGCCGCTGGA CGTGCTGGGC GTGAACTACT ACAGCCCCAC CGTCGTGCGC
GCCTGGGACG GCTCGGCCCC CCGGGCCGAG AACGACGGGC ACGGCAACAG CGCCCACAGC
CCGTGGGTCG CCTCCACCGA CGTCGAGTTC CCCGAGCTGC CGGGGGAGAA GACGGCCATG
GGCTGGAGCA TCGACCCGCG GGGCATGACC GAGCTGCTGC TGCGGATCCA CCGCGAGCAC
CCCGGCCTGG AGCTGCTGGT CACCGAGAAC GGCGCCGCCT ACGACGACGT CGTCGTCGCC
GGGCAGGTCC ACGACGTCGA GCGCACCCGC TACCTGCGCG ACCACCTCGC GGCCGTGCTC
GACGCCGTGG AGGCCGGCGC CCCCGTCACC GGTTACTACC TGTGGTCCTT CCTGGACAAC
TTCGAGTGGG GCTACGGGTT CTCCAAGCGC TTCGGCGTCG TCCACGTCGA CTACGCGACC
CAGGAACGCA CCGTCAAGGA CAGCGCGCTC TGGTACGCCG ACGTCGTCAG CCGCAACGCG
CTCCCGGCCG CCGACGCCGA CTGA
|
|---|
| Protein sequence | MTTTEERSTT PAPSAAERTF PPGFVWGTAT ASYQVEGAVA EDGRTPSIWD TFSHTPGRVV
AGDTGDVADD HYHRFREDIA LMKRLGMASY RFSVAWPRIT PQVSADELGP VNPAGLAFYS
TLVDELIAAG IEPAVTLYHW DLPQALEDAG GWTARTTAER FAEYAEVVAG ALGDRVRTFI
TLNEPWCSAY LGYASGVHAP GRTEPASALA AVHHLNLAHG LGAAAVRRAA PGARVALTLN
LAWVRTEGTS EADADAVRRV DGLQNRVFLD PVLRGTYPAD VQADTSSVTD WSFVREGDLA
LIHQPLDVLG VNYYSPTVVR AWDGSAPRAE NDGHGNSAHS PWVASTDVEF PELPGEKTAM
GWSIDPRGMT ELLLRIHREH PGLELLVTEN GAAYDDVVVA GQVHDVERTR YLRDHLAAVL
DAVEAGAPVT GYYLWSFLDN FEWGYGFSKR FGVVHVDYAT QERTVKDSAL WYADVVSRNA
LPAADAD
|
|---|
| |