| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3954 |
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| Symbol | sdhA |
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| ID | 5337761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | - |
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| Start bp | 2937174 |
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| End bp | 2939006 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001363681 |
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| Protein GI | 152967897 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACGC ACCAGTTCGA CGTGGTCATC GTCGGCGCGG GCGGCGCGGG GATGCGCGCG
GCCCTCGAAT CCGGTCAGCG GGCCCGCACC GCGGTCCTCA CCAAGCTCTA CCCGACGCGC
TCGCACACCG GTGCGGCCCA GGGCGGCATG TGCGCCGCGC TGGCCAACGT CGAGGAGGAC
AACTGGGAGT GGCACACCTT CGACACCGTC AAGGGCGGTG ACTACCTCGT CGACCAGGAC
GCCGCCGAGG TGATGTGCAA GGAGGCCATC GACGCGGTCC TCGACCTCGA GAAGATGGGC
CTGCCCTTCA ACCGCACGCC CGAGGGCAAG ATCGACCAGC GCCGCTTCGG CGGGCACACC
CGCGACCACG GCAAGTCCCC CGTGCGCCGC AGCTGCTTCG CCGCCGACCG CACCGGTCAC
ATGATCCTGC AGACCCTCTA CCAGCAGTGC GTGAAGCACG AGGTGGAGTT CTTCAACGAG
TTCTACGTCC TCGACCTGCT GCTCGTCCCC GCCGAGGAGG CGCGGACGGG CACCGAGATC
GAGGGCGCCG CCGACCAGCC CGGTCTGGCC ACCCCGCCGA CCATCGGCGT GCCCGGCGAC
AAGCGCATCG CCGGCGTCGT GGCCTACGAG CTGGCCACGG GCGAGATCCA CGTCTTCCAG
GCCAAGTCGG TCGTCCTCGC CACCGGCGGG GCGGGCAAGG TCTACAAGAC GACCTCGAAC
GCGCACACCC TGACCGGCGA CGGCATGGGC ATCGCCTACC GCCGCGGCCT GCCGCTGGAG
GACATGGAGT TCTTCCAGTT CCACCCAACG GGTCTGGCCG GGCTGGGCAT CCTGCTCTCC
GAGGCCGCGC GCGGGGAGGG TGGGATCCTG CGCAACGCCG ACGGCGAGCG CTTCATGGAG
CGCTACGCCC CCACCATCAA GGACCTCGCC CCGCGCGACA TCGTCGCCCG GTCGATGGCC
AACGAGGTGC GCGAGGGCCG CGGGGCGGGC CCGAACAAGG ACTACGTCCT GCTCGACCTG
ACCCACCTGG AACCCGCGCA CATCGACGCG AAGCTGCCCG ACATCACGGA GTTCGCCCGC
ACCTACCTGG GCGTGGAGCC GTACACCGAG CCGGTGCCGG TCTACCCGAC GGCGCACTAC
GCCATGGGCG GGGTGCCGAC CAACGTCGAC GCCGAGGTGC TGCAGGACAA CACCCGCGTC
GTCCCCGGCC TCTACGCCGC GGGCGAGGTC GCGTGCGTGT CCGTGCACGG CTCCAACCGG
CTGGGCACGA ACTCGCTGCT GGACATCAAC GTGTTCGGCA AGCGGGCCGG CATCGCCGCG
GCGGAGTACG CGACGAAGGC CGAGTGGATC GCCGTGCCCG AGGGGTCCGA GCTGCCCGTC
GTGAACTGGA TGGCGGAGCT GCGCGACCGC GCCCAGGGCG AGCGCATCTC CGACATCCGT
CGCGAGCTGC AGGAGACGAT GGACGCCAAC GCCCAGGTCT TCCGCACCGA GGCGACGCTG
AAGCAGGCCC TCACCGACAT CGAGCGGCTG AAGGAGCGCT ACGCCCGCGC CTCGGTGCAG
GACAAGGGCA AGCGGTTCAA CCTCGACCTC CTCGAGGGCC TGGAGCTCGG GTTCCTGCTC
GACCTGGCCG AGGCCATGTG CCTCGGCGCG CTGGAGCGCA AGGAGTCGCG CGGGGGGCAC
TTCCGCGAGG ACTACCCCAA CCGCGACGAC GTGAACTACA TGCGGCACAC GATGGTGTAC
CGCGAGTACG CCGCCGACGG TTCCTACTCG ACGCGCCTGG ACTTCAAGCC CGTCGTCCAG
ACGCGCTACC AGCCGATGGA GCGCAAGTAC TGA
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| Protein sequence | MQTHQFDVVI VGAGGAGMRA ALESGQRART AVLTKLYPTR SHTGAAQGGM CAALANVEED
NWEWHTFDTV KGGDYLVDQD AAEVMCKEAI DAVLDLEKMG LPFNRTPEGK IDQRRFGGHT
RDHGKSPVRR SCFAADRTGH MILQTLYQQC VKHEVEFFNE FYVLDLLLVP AEEARTGTEI
EGAADQPGLA TPPTIGVPGD KRIAGVVAYE LATGEIHVFQ AKSVVLATGG AGKVYKTTSN
AHTLTGDGMG IAYRRGLPLE DMEFFQFHPT GLAGLGILLS EAARGEGGIL RNADGERFME
RYAPTIKDLA PRDIVARSMA NEVREGRGAG PNKDYVLLDL THLEPAHIDA KLPDITEFAR
TYLGVEPYTE PVPVYPTAHY AMGGVPTNVD AEVLQDNTRV VPGLYAAGEV ACVSVHGSNR
LGTNSLLDIN VFGKRAGIAA AEYATKAEWI AVPEGSELPV VNWMAELRDR AQGERISDIR
RELQETMDAN AQVFRTEATL KQALTDIERL KERYARASVQ DKGKRFNLDL LEGLELGFLL
DLAEAMCLGA LERKESRGGH FREDYPNRDD VNYMRHTMVY REYAADGSYS TRLDFKPVVQ
TRYQPMERKY
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