| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3026 |
|---|
| Symbol | |
|---|
| ID | 5336950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3977897 |
|---|
| End bp | 3979150 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_001362754 |
|---|
| Protein GI | 152966970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG CTATCAAGGC GCCGGCACGT TCGGGGCACA CGACCTTCGA GTACTCCGCC
CGCGACAGGT CGGGCAAGCT CGTCAAGGGC GTCCTCGAGG CCAGCGACAG CAGTGCGGTC
CTGGGCCGCC TCAAGAGCCA AGGCCTCGCC CCGGTCTCGG TGGAGGCGTC CAAGGCGGGC
AAGGGCATGC AGATGGAGAT CGCGCTACCC GGGTCCAACA GGGTCGGGCT GAAGGATCTC
GCACTGATGT CGCGTCAGTT CGCGACGATG GTCTCCTCCG GGCTCTCGCT CATCAGGGCG
CTCTCGATCC TGGCCGAGCA GGCGGAGAGC AAGAAGCTCG CGGCCACCCT CGGAGAGGTA
CGTGCCGAGG TCGAGACGGG TGCTTCCCTC TCCACGACCT TGGCGAAGCA CGACCGCATC
TTCCCCCCGT TGATGATCAA CATGATCCGG GCCGGCGAGG TGGGCGGTTT CCTGGACCAG
GTGCTGGTCC AGATCGCCGA CAACTTCGAG TCGGAGGTGA AGCTCAAAGC CAAGGTGAAG
TCGGCGATGA CCTACCCGGT GGTCGTCTTC ATCATCGCCA TCCTCGCCGT CGTCGGGATG
CTCCTGTTCA TCGTCCCGGT CTTCACCCAG ATGTTCTCCG ACCTCGGCGG CAAGCTGCCG
CTACCGACGC AGATCCTCGT CTACCTCTCC ACCGCCATGA AGTGGGGCGC GCCTTTCGGT
GTCGTCGCCC TCGTCGTCGG GTCGATCGTC TGGAACCGTG TCAGGAACAA GGACGAGGTC
CGCAACATTG TCGACCCCGT CAAGCTGAAG ATGCCAATTT TCGGCTCGTT GACGCAGAAG
ATCGCCCTGA GCAGGTTCAC TCGGAACCTC GGGACCATGC TGCGTTCTGG TGTTCCCATC
CTGCAGAGCC TGGAGATCGT CGGCAACGCG GCGGGCAACG TGGTCATCAG GCGAGCAGCC
ATCGACGTCA TGGAGAGCGT CCGCTCGGGG CGATCCCTCG CTGGACCGCT GGCCGAGCAC
AAGGTGTTCC CGGCGATGGT CGTGCAGATG ATGAGCGTCG GGGAGGACAC CGGTGCCCTC
GACTCCATGC TGCATAAGAT CTCCGACTTC TACGACCAGG AGGTCGAGGC CACCACGGAC
GCCCTCACCA GCCTGATCGA GCCGCTGATG ATCGCCGTCC TCGGCGGCAT CATCGGCTCC
ATGATCATTG CGCTGTACAT GCCGATCTTC GGTGTTTTCA ACCTCATCAG CTGA
|
|---|
| Protein sequence | MATAIKAPAR SGHTTFEYSA RDRSGKLVKG VLEASDSSAV LGRLKSQGLA PVSVEASKAG
KGMQMEIALP GSNRVGLKDL ALMSRQFATM VSSGLSLIRA LSILAEQAES KKLAATLGEV
RAEVETGASL STTLAKHDRI FPPLMINMIR AGEVGGFLDQ VLVQIADNFE SEVKLKAKVK
SAMTYPVVVF IIAILAVVGM LLFIVPVFTQ MFSDLGGKLP LPTQILVYLS TAMKWGAPFG
VVALVVGSIV WNRVRNKDEV RNIVDPVKLK MPIFGSLTQK IALSRFTRNL GTMLRSGVPI
LQSLEIVGNA AGNVVIRRAA IDVMESVRSG RSLAGPLAEH KVFPAMVVQM MSVGEDTGAL
DSMLHKISDF YDQEVEATTD ALTSLIEPLM IAVLGGIIGS MIIALYMPIF GVFNLIS
|
|---|
| |