Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_2025 |
Symbol | |
ID | 5335352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 196183 |
End bp | 198975 |
Gene Length | 2793 bp |
Protein Length | 930 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001361774 |
Protein GI | 152965990 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.76545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCTGAGG ATCCCGACCC GCCCGTCGCC CCCGTGGCCC GGGTGGCGGC CCGCGTGGCG GCCCAGGCCC TGCTGGCCGA CGAGGCCCGC GTCGCCGCGG CCCGCCGGCT GCAACCGGCC GCGACCACCG CGACGGGCCG CGCCCGAGGC GCGGGGCAGA GCGCGTGGCC GGCGCTGGAC CGCCTGGCGG GGCTGGCCGC GCGCCTGCTC GGGACCCCCG CCGCCCAGGT CTCCCTGCTC AGCGACGTCC AGACCGTTCC CGCCGCCGCC GGCCTGGACC CGCAGGCCCA CGCGGGGGCC GGCCCGCTGG CGGACTCCCT GTGCACGGTC ACCGCCGCCG GCGGGGGGCC CCTGGTCGTG TCGGACGCCG CCACCGACGA GCGGGTCGCC GGGTTGCCGC CGGTGACCTC CGGGGCGGTC GGGGCGTACC TGGGGGTGCC GCTGACCGGC CAGGACGGGC ACGTGGTGGG CGCGCTGTGC GTCTTCGACC CCGCCCCGCG CACCTGGAAC GCCACCGACG TCGCCCTGCT GAGCGACCTG GCCACCGCCG TGGCCAGCGA GCTGGAGCTG TCCGCGCTGA GCGTGGACTA CGAGGCCGCC CGTCAGCGCT GGCAGCTGTC GATCACCGCC GCCGGCATCG GCAGCTTCGA CTGGGACCTG CTCACCGGTG AGCTGGTCTG GGACGAGCGG CTGATCGAGC TGTTCGGCTA CGGCGGTGAC GTCGACGGGT CCGACGGGCC CGTGGTGTTC GACCGCTCCA TCGAGGCGTT CAACGCCCGG CTACACCCCG AGGACGTGCC CCGGGTCAGC CAGGCGCTGA CCGAGTGCAT CAGCACCTGC GGGGACTTCG AGGCGGAGTA CCGGGTGGTG CGCCCCGACG GGTCCACCCG CTGGGTCCAG GCCCGCGGCA CCGCCCTGGC CGGCGAGGAC GGCACCGCGG TGCGCCTGCT CGGCGCCGCC TACGACACCA CCGCCCAGCG CGAGGCGGAC GTGCGCATCG CGCGGGTGCT GGAGTCGATG TCCAGCGCCT TCTACTCCCT GGACGTCGAC TGGCGCTTCA CCTACGTCAA CGCCGAGGCC GAGCGGCTGC TCCAGCGCCC GCGGGAGGAG CTGCTGGGGG GCGACATCTG GGACCTGTTC CCCGGCGCGG TCGGTGCCGC CTTCGACACC GAGTACCACC GCGCGGTCGA GACCGGCCAG GCGGTGACCT TCGAGGCGTA CTACCCGCCT CCGCTGGACG GCTGGTACGA GATCCGGGCC TGGCCGGGCC CGGACGGGCT GTCGGTGTAC TTCGTCGACG TCACCGCCCG CAAGCACGCC CAGCAGGCCG CGGAGACCGC CCGGCAGGCG GCGGAGAACG CCAACGCCCG CCTGGCCCTG CTGGCCACGA CCTCGCGGCA GATGGCCGAG ACGCTGGAGG CGGAGGCGGC GGTGACCGCC CTGGCGCAGC TGGTGGTGCC CGCGCTGGGT GACTGGTGCC TGGTCAGCGT CCTGGACGAC GAGACCAGCG CCGGCCCCCC GACCAGTGCC CGTGCCACCG CGCGCCGCGA GCGGCGGCGA CGCGACCAGC CGCGGGGTCA GCGGCGGGGA CTGCGCGACG CCGGCAGCTG GCACCGCGAC GCCCGGGCCC GTGACCTGGT GCGCCGCTAC GCCGAACGCC GCCTGGTCGA GCTGGACGAC TCCGCCTTCC TCTGGCGGGC GTTGCGCGAG GAGCAGCCGG TGTTCATCGA CGACGCCACC GCCGCCCTGA CCGCCCTGCT GGACCCGGCG GGAGAGGGCC GGGCCCTGCT GGCGCAGCTC GCTCCCGCGG CGGGGGTGAT CTTCCCCCTC CGTGGACGGG GACGCACCGT GGGACTGCTG TCGCTGTTCA TCGACGCCGG CCGGGAACGC TGGAGCGAGG AGGAGCTGGC CACCATCGCC GAGGTCGCCG ACCGCGCCGG TCTGGCCCTG GACTCCGCCC GGTTGTACCG CCAGCAGCGC GACCTGGCCG CCGCCTTCCA GCGCTCCCTG CTGACCGCCC CGCCCGAACC GGACCACGGG CAGATCGTCG TGCGCTACAC CCCCGCGGCC GAGGCCGCCC AGGTGGGCGG GGACTGGTAC GACGCGTTCA TGCAACCCGA CGGCGCCACC GTGCTGGTCA TCGGCGACGT CATCGGCCAC GACACCGAGG CCGCCGCGGC CATGAGCCAG GTCCGCACCA TCGTGCGCAC CCTGGGCGCC CTCGGCGAGG AGTCCCCCGC GAGCATCCTG GCCGGCACCG ACCGGGCCAT GGCCAACCTG CAGCTCACCA CCACCGCCAC CGCCATCGCC GCGCGCCTCG AGCAGGACCT CGACGAGCGC GAGCGGGGCG TGACGCGGCT GCGCTGGTCC AACGCCGGGC ACCCGCCGGC GATGGTCGTC AACCCCGACG GCACCGTCAC CCCGCTGCTG GGCCTGCACC CGGACCTGCT GCTGGGAGTC GTCCCCGGTA CCGGACGCCG GGACACCGAG GTCGTCCTCG GCCGCGGGGC GACGGTGCTC CTCTACACCG ACGGCCTGGT GGAGCGCCGG GACCAGCCGC TGCAGGAGGG GCTGGAGAAG CTGCAGGCGG TGCTGGAGGA CCTGGCCGCG CAGGACGGCG ACCTGGACGG CCTGGTGGAC CAGGTGCTGG CCCGGATGCT GCCGCCGGAC CCCGAGGACG ACGTGGCCGT CATCGCCGTG CGCCTGCACC GCCAGGACCG GGCCCGCCCC GCCGAGGCCG GTCCCGGGAG GGTTCCGCCG CACGTGCCCC CGGAACCCGA ACCGCCGCGC TGA
|
Protein sequence | MPEDPDPPVA PVARVAARVA AQALLADEAR VAAARRLQPA ATTATGRARG AGQSAWPALD RLAGLAARLL GTPAAQVSLL SDVQTVPAAA GLDPQAHAGA GPLADSLCTV TAAGGGPLVV SDAATDERVA GLPPVTSGAV GAYLGVPLTG QDGHVVGALC VFDPAPRTWN ATDVALLSDL ATAVASELEL SALSVDYEAA RQRWQLSITA AGIGSFDWDL LTGELVWDER LIELFGYGGD VDGSDGPVVF DRSIEAFNAR LHPEDVPRVS QALTECISTC GDFEAEYRVV RPDGSTRWVQ ARGTALAGED GTAVRLLGAA YDTTAQREAD VRIARVLESM SSAFYSLDVD WRFTYVNAEA ERLLQRPREE LLGGDIWDLF PGAVGAAFDT EYHRAVETGQ AVTFEAYYPP PLDGWYEIRA WPGPDGLSVY FVDVTARKHA QQAAETARQA AENANARLAL LATTSRQMAE TLEAEAAVTA LAQLVVPALG DWCLVSVLDD ETSAGPPTSA RATARRERRR RDQPRGQRRG LRDAGSWHRD ARARDLVRRY AERRLVELDD SAFLWRALRE EQPVFIDDAT AALTALLDPA GEGRALLAQL APAAGVIFPL RGRGRTVGLL SLFIDAGRER WSEEELATIA EVADRAGLAL DSARLYRQQR DLAAAFQRSL LTAPPEPDHG QIVVRYTPAA EAAQVGGDWY DAFMQPDGAT VLVIGDVIGH DTEAAAAMSQ VRTIVRTLGA LGEESPASIL AGTDRAMANL QLTTTATAIA ARLEQDLDER ERGVTRLRWS NAGHPPAMVV NPDGTVTPLL GLHPDLLLGV VPGTGRRDTE VVLGRGATVL LYTDGLVERR DQPLQEGLEK LQAVLEDLAA QDGDLDGLVD QVLARMLPPD PEDDVAVIAV RLHRQDRARP AEAGPGRVPP HVPPEPEPPR
|
| |