Gene Krad_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_1896 
Symbol 
ID5337603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp329021 
End bp330325 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content79% 
IMG OID 
Producttranscriptional regulator, CdaR 
Protein accessionYP_001361646 
Protein GI152965862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.612834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGGG TCACATCGCG CAGCGCTGGT CGATCACCAC GTTCCGCACC CTCCCGGGCC 
GCTCGGTGCC ATCATCCGGC GGTGCCCGCG ACCCCGCCCG ACCTCCCCGT CCCGGGCCGC
CCCGCCGACG CGCCCGACGC GCCCGACGCC GACCGCCTCG ACGCCGTGGC GCGGGCCGCG
GCCCAGGACG CGGGGGGCAT CGACCCCGCC CTGCTCGGCG ACTTCCTCGA CGCGGTCTGG
CGGGCCGTCG TCGAGGGCCG CCGGCTGTCC GCGCCCCGCA TCGCCCGCTA CCGGGACGTC
GGGGGGAAGG CGGCGACCTC GGGCGTGGCG CTGCGCGCCC TGCTCGACCT CTACCTCTCC
GCCGCCTGGC GGCTGTGGCG CCACCTGCCC CCCATCGCCG GCGCCGCCGG GGACCCCGAG
GGCGTCGTGA CCGCCGGCGA GGTCGTCCTG CGGGCCAGCG ACGACGCCGT GGCCGCCCTC
ACCGAGGGCT ACCAGCTCGC CCGGCGCCAG CTCGTGCGCC GGGAGGAGTC CGACCGCCGG
GAGTTCGTCG ACGACCTCCT CGCCGGCACC GCCGACGTCA CCGGCCTGCT GCGGCGCGCC
CCCCGGTTCG GCCTCGACCT CACCGGCCCG CACGCGGTCT GCGTCGTGCG GGCCGGTGCG
CCCTTCCGCG ACGGCAGCGC CCAGGTCGCC ACGGTCGAGC GGCGCCTGCA CGGCGGCGTC
GCCGACGCCG ACCCGCTGGT GGCGACCAAG GACGGGGCCC TCGTCGTCGT CTTCGCCGCC
CCCGATCGGG CCGCCGTCGA CGAGGTCGTC CTGCGGCTGC GCGACGCGCT CGGCTCCCCG
CACCGCACGG GCTGGCGCGC CGGGGTCGGA CGACCCGCGG CCGGGGGCTC CGGGGTCGTC
GCCTCCTTCG AGCAGGCCCG CCGCGCCCTC GACCTGGGGG CCCGGCTGGG AGCCGGCGAC
CCCGGGCGCG ACCCGGTGGC CGACGCCGCG GACCTGCTCG TCCACGACGT GCTGCTGCGC
GACCACGCGG TCGCCCGGGA CCTCGTCGAG TCGACGCTGG CCCCGCTGCG GCAGGTGCGC
GGGGGGGTCG AACCGGTCCT GGTGACCCTG GAGGCGTACC TGGACTCCGG GGGCAACGCC
ACCGAGGCGG CGCGCCGGCT GCACCTGTCC GTGCGGGCCG TCACCTACCG CCTGGCCCGG
GTGCGCGACC TCACCGGCAT CGACGCGACG CGCCCGGAGC AGCGGTTCGG GCTGCAGGCG
GCGGTGCTGG CCGCACGGGC CATGGGGTGG CCCGGGGAGG GCTGA
 
Protein sequence
MTRVTSRSAG RSPRSAPSRA ARCHHPAVPA TPPDLPVPGR PADAPDAPDA DRLDAVARAA 
AQDAGGIDPA LLGDFLDAVW RAVVEGRRLS APRIARYRDV GGKAATSGVA LRALLDLYLS
AAWRLWRHLP PIAGAAGDPE GVVTAGEVVL RASDDAVAAL TEGYQLARRQ LVRREESDRR
EFVDDLLAGT ADVTGLLRRA PRFGLDLTGP HAVCVVRAGA PFRDGSAQVA TVERRLHGGV
ADADPLVATK DGALVVVFAA PDRAAVDEVV LRLRDALGSP HRTGWRAGVG RPAAGGSGVV
ASFEQARRAL DLGARLGAGD PGRDPVADAA DLLVHDVLLR DHAVARDLVE STLAPLRQVR
GGVEPVLVTL EAYLDSGGNA TEAARRLHLS VRAVTYRLAR VRDLTGIDAT RPEQRFGLQA
AVLAARAMGW PGEG