Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1783 |
Symbol | |
ID | 5334638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 452195 |
End bp | 453997 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | putative cell wall binding repeat 2-containing protein |
Protein accession | YP_001361533 |
Protein GI | 152965749 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.925315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.683781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCCGGT CCCGGAACCT CGCGGGTGCC GACGCGGGGA ATCCGCGTGA ACGCTGGGTG ACCACGCAGG GGGGAACGCT CAGGGCACCC TCACCCGGCA GGGGCGGGGT TCCCTGGGCG CTGCGGCGCC GTCAGCGCAG TTCGTGCGCC CAGGCGCTGG CCCACTCGTC CGCGGCGCCG CTGTCCAGGG CGTCGCGCAG GTCGAGCAGC GCCGTGAGCC GGTCGGTGCC CAGCCCGACG AGCGCGACGA CCGTCGCCGC CCGGACGGCG TCGTCGTCGA GGTCGTCGCG GGTGAGCCGG TGCAGGTCCG GCAGCGGGGC CGCGGCTCGT CGCGGTCCGC GCCGGTGCTC GACGTGGTTC CACAGCTCGT GGACGTCAGG GGTGGCCATG CGTTCCTCGC TCGTCGTTCG TCGTGCCTCG GGGTCGCGGG GCGCCCGGCT CGGTCGCAAC CGGCCGCGAT CGCCCCACCC CCGGTGCAAC AGCGCCCGGG CCCCCTCCGA AGCCGGCGGG ACGTGTCGGG TGCATCACGT CCCCCGGGCG GAGGCCGGTC CGCGGACCGG GCGAGGACGG TCACCGCCCG GAGGCGTTCC TCCGGTCCGG TGGTCCCCCC TCCCCCGACC GGGTGAACCT CGCCCGGCGA TCACCGGGCG CGACGTTCCT GGCCTAGGTT CCGCGAAGTG CGGCGAGGCC GCCGCACCTC CCCGACCCGA GGACCACACC ATGCGCTCCG CACGTCGACC CACCCTGTCC GCGCTCGCCG GCGCCACCGT CCTCGCCACC TGCGCCCTCA CCGGTGGCGC CGCCGTGGCC GCGACCCCCA CCGGTCCGGC CCCCGCCGCG ACCTCGCCGA CCGCTCAGAC GGTGGTGCCG AAGATCGGCA CCCCCTTCCC CTACGTCGGC CTCGTCCGCG CCGCCGGCGC GGACCGCTAC GAGACCGCCG CCGTCATCTC CCAGGGCTCC TTCGCCCCCT CGGTGGGCTC CACCGTCTTC GTCACCAGCG GCGAGGCCCC CGCCGACGCC CTCACCGCCG GCCCCGCCGC GGCCTCCCTG GACGCACCGC TGCTGCTCAC CCGGGCCGAC GCGCTGCCCG CGGCCACCGC CGCGGAACTG GAACGCCTCA CCCCCGCCAC CGTCTACGTC GTCGGGGGCA GCGACCGCGT CTCCGCGACC ACCCTGGCCG CCATCGCCGC CGCCGCCCCC GGCGCCACCG TCGAGCGCAT CGCCGGGCAG GACCGCTACG ACACCGCCGT CGACGTCGCC GAGAAGTTCT TCCCCGCCGC CGACGGCGTG GTCCTCACCC GCGGCGACAC CTTCCCCGAC GCCCTCTCCG GCGGGGCCGC GGCCGCCGCC ACCGGCGTCC CCCTCATGAT CACCGAACCC GGTGCGCTGC CCGCCCCGGT CGCGGCGTGG CTGGCGAGCC GGACCTTCGA GGCCAGCCTG GTCGTCGGGG GCCCCACCTC CGTCAGCGAC ACCGTCGCCG CCGCCCTCGC CGCCCGCACC GGCGACCCCA CCGCCTCGAC CCGCGTGGCC GGCGCCGACC GCTACGACAC CGCCGCCGCG GTCGCGACGG AGGTCTTCCC CGACGCCGTC ACCGCCGTCA TCGCCACCGG CGACAACTTC CCCGACGCCC TCGCCGGGGT CCCCGCCGCC GCGCTGAACG CCGCCCCGAT GCTGCTGCTG CCCCAGCAGT GCACCCCCGT CTCGGTCTAC GACTACCTCG TCGGCAGCGA CGTCAGCGCC GAGATCGTCC TCGGCGGGCC CACCTCCGTC ACCGCCGAGG CGCTCACCAC CAACTGCGCC TGA
|
Protein sequence | MLRSRNLAGA DAGNPRERWV TTQGGTLRAP SPGRGGVPWA LRRRQRSSCA QALAHSSAAP LSRASRRSSS AVSRSVPSPT SATTVAARTA SSSRSSRVSR CRSGSGAAAR RGPRRCSTWF HSSWTSGVAM RSSLVVRRAS GSRGARLGRN RPRSPHPRCN SARAPSEAGG TCRVHHVPRA EAGPRTGRGR SPPGGVPPVR WSPLPRPGEP RPAITGRDVP GLGSAKCGEA AAPPRPEDHT MRSARRPTLS ALAGATVLAT CALTGGAAVA ATPTGPAPAA TSPTAQTVVP KIGTPFPYVG LVRAAGADRY ETAAVISQGS FAPSVGSTVF VTSGEAPADA LTAGPAAASL DAPLLLTRAD ALPAATAAEL ERLTPATVYV VGGSDRVSAT TLAAIAAAAP GATVERIAGQ DRYDTAVDVA EKFFPAADGV VLTRGDTFPD ALSGGAAAAA TGVPLMITEP GALPAPVAAW LASRTFEASL VVGGPTSVSD TVAAALAART GDPTASTRVA GADRYDTAAA VATEVFPDAV TAVIATGDNF PDALAGVPAA ALNAAPMLLL PQQCTPVSVY DYLVGSDVSA EIVLGGPTSV TAEALTTNCA
|
| |