| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1655 |
|---|
| Symbol | |
|---|
| ID | 5336141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 547984 |
|---|
| End bp | 549090 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_001361405 |
|---|
| Protein GI | 152965621 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.055455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.208807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATCG CCGAGATCCA GTCCCGCATC GCCGACATCG AGTCCCGCAT CGCGCAGCTG
TCCGGGACGC TGCCGGTGCG CACCCTCGCG CGCACCGCCG CGACCACGTC CACGGCGCCG
GCCACGGCCA CGGCCACGGC CGGGGTCGGC TCCGAGGGCT TCGCGGACCT GCTGTCCACC
AGCGGTTCCG CCACCCCCGC CGCGACGGCG GGGCTGGTCG GGCGCGGGAT GCGGACCCTC
AGCTCCAGCT CGGCGGGGGA GCAGCTGCTC TCCGTCGCCA AGCAGTACAC CGGCGTCCCC
TACAAGTGGG GCGGGACGAC CCCGGCCGGC TTCGACTGCT CCGGGCTGAT CCAGTACGCC
GGGAAGCAGG TCGGCCTGAC GCTGCCGCGC ACCGCGGCCC AGCAGGCCAC GGTCGGCACC
GCCGTGCCCG GCCTCGCCCA GGCCAGGCCC GGCGACCTTG TGGTCCTGGA GAACGGGCAC
CACATCGGGA TCTACGTCGG CGACGGCAAG ATGCTGCACG CGCCGAAGAC GGGTGACGTC
GTGAAGATCT CCAAGGTCTG GGAGACCCCC ATGACCATCC GCCGCCTCGG CGCCGCCGCG
GCCACCACCG CCGCCGGCGC CGGCGTCGCC GCGGCCCTGC TCACCGGGGT GGGGGCGACC
TCCGCGGCCG ACACCTCCAG CTACGTCCGC CCCGCCTCGC TGTCCTCCGC CTCGTCGGCC
TCCGCGAAGT CCGCCCCCTA CGAGGCCGCC TTCAGCGCCG CGGAGCAGAA GCACGGGCTG
CCCGCCGGGC TGCTGAGGGC CGTGGCCAAG CAGGAGTCCG GGTTCAACCC GAACGCCAAG
AGCCCCGCCG GGGCGACCGG GCTCATGCAG TTCATGCCCG CCACCGCCCG CAGCCTCGGG
ATCGACCCCC GCGACCCGAT GGCCTCCATC GACGCCGCCG GCAAGTACCT CTCGCAGAAC
CTGAAGACCT TCGGCTCGGT GCCGCTGGCC CTGGCCGCCT ACAACGCCGG GCCCGGCAAC
GTCCGCAAGC ACGGCGGCAT CCCGCCCTTC GCCGAGACCC AGAACTACGT CAAGAAGATC
ACCGCCGACC TCGGGAGTGC CGCGTGA
|
|---|
| Protein sequence | MSIAEIQSRI ADIESRIAQL SGTLPVRTLA RTAATTSTAP ATATATAGVG SEGFADLLST
SGSATPAATA GLVGRGMRTL SSSSAGEQLL SVAKQYTGVP YKWGGTTPAG FDCSGLIQYA
GKQVGLTLPR TAAQQATVGT AVPGLAQARP GDLVVLENGH HIGIYVGDGK MLHAPKTGDV
VKISKVWETP MTIRRLGAAA ATTAAGAGVA AALLTGVGAT SAADTSSYVR PASLSSASSA
SAKSAPYEAA FSAAEQKHGL PAGLLRAVAK QESGFNPNAK SPAGATGLMQ FMPATARSLG
IDPRDPMASI DAAGKYLSQN LKTFGSVPLA LAAYNAGPGN VRKHGGIPPF AETQNYVKKI
TADLGSAA
|
|---|
| |