Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1562 |
Symbol | |
ID | 5336001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 647943 |
End bp | 648608 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | TrkA-N domain protein |
Protein accession | YP_001361312 |
Protein GI | 152965528 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.308966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.515995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACTTCG TGATCATGGG CTGCGGCCGG GTGGGCTCGA GCCTGGCGGT CACCGTCGAG CAGCGCGGGC ACAGCGTGGC CGTCATCGAC CAGAACGCCG ACGCCTTCCG CCGCCTGGGC CCGACCTTCG CCGGCCGCCG CGTGACGGGG GTGGGCTTCG ACCACGACAC CCTCGTCGAG GCGGGCATCC ACGAGGCCGG CGCCTTCGCC GCGGTGTCCT CCGGCGACAA CTCCAACATC CTCGCCGCCC GCGTGGCGCG GGAGAAGTTC GACGTCGACA ACGTCGTGGC CCGCATCTAC GACCCCGGCC GGGCCGAGAT CTACGAGCGG CTGGGCATCC CCACCATCGC CACCGTCCGC TGGACCGCCG ACCAGGTCCT GCGCCGCCTG GTGCCCCAGG GGGCGCTGAG CGAGTTCCGC GACCCCTCCG GGCGTGTCGT GCTCGTCGAG ACCATCGTCC ACGAGGGCTG GACCGGCCGT CCGCTGTCCG CGCTGGAGGC CGCGGCCGGG GTGCGGGTGG CCTACGTGAC GCGGCTGGGC CAGGGGATCG TCCCCACCCG GGGCATGGCC TTCCAGGACG GCGACGTGGT GCACGTCGTC GTCGCCGACG AACGGCTGGG GCAGGCCACC GCCCTGCTCG CCGCCGCTCC CGAGGGGGAC TCCTGA
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Protein sequence | MHFVIMGCGR VGSSLAVTVE QRGHSVAVID QNADAFRRLG PTFAGRRVTG VGFDHDTLVE AGIHEAGAFA AVSSGDNSNI LAARVAREKF DVDNVVARIY DPGRAEIYER LGIPTIATVR WTADQVLRRL VPQGALSEFR DPSGRVVLVE TIVHEGWTGR PLSALEAAAG VRVAYVTRLG QGIVPTRGMA FQDGDVVHVV VADERLGQAT ALLAAAPEGD S
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