Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1395 |
Symbol | |
ID | 5334743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 824210 |
End bp | 826546 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | PII uridylyl-transferase |
Protein accession | YP_001361147 |
Protein GI | 152965363 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.252676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00675271 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGCGGGCCG GACGCCCCGG CCCGCACCGC CGCGCCGAGC TCGTCGAGCT CGTCGAGTCC CGGCTGCGCG ACGTGTGGGA CGACGCCCTG GCGCCCTTCG CGGCGGGGGC GCCGGACCTG CTGGGGGACG GCTCGGGGGT CGCCCTGGCC TGCGTGGGCT CGCTGGCCCG CGGCGACTGC GGTCCCGCCA GCGACGTCGA CCTCGTCCTC CTGCACGACG GCCGGCGCCT GACCCGCGAC GACGTCGCGG CGCTCGCCGA CCGCGTCTGG TACCCGCTGT GGGACCAGGG GCTGCGCCTG GACCACTCGG TGCGCACGGC CAAGGAGTGC CGCGAGGTCG CCGCCGCGGA CCTCGCCGCC GGGACCGGGC TGCTCGATCT GCGCGTCGTC GCCGGCGACG GCGGGCTCGT GGCCCGCACC CGCGGGCACC TCCTCGACGA CTGGCGCGCC GGCGCCCGCC GGCGCCTGCC CCAGGTCCTC GACGCCCTCG CCGAGCGCGC CGCGCGCTTC GGCGAGCTCG CCTACCTGCT CGAACCCGAC CTCAAGGAGG CCCGCGGCGG GCTGCGGGAC GCCATCACGC TGCGCGCGCT GGCCGCGAGC TGGCTCACCG ACCGCCCCCA CGGCGCCGTC GACGAGGCCC ACACCGTCCT GCTCGACGTC CGCGACGGCC TGCAGGCCTC CTCCGGGCGG CCCGGGGACC GGCTGGTCCT GCCCGAGCAG GACGCCACCG CCGTCGTCTG CGGCTACGCC GACGCCGACC TCCTGCTGGC CGCCGTCGCC CAGGCCGCGC GCACCATCTC CGCCGCCGTC GACGTCACCA CCCGCCGCGC CCGGCAGTCG ATGCCCACCC GCCGCTTCCG CGCCGCCGGC CGCCGGCCCC GGCTGCGCTC GCTGGGCCAC GGCCTCGTCG AGCACGACGG GGAGGTCGTC CTCGGCGCCG GGGTCAGCCC CGCCGACGAC CCCGTCCTGC CGCTGCGCGC CGCCGCGACC GCCGTGCGGG TCGGGCTGCC GCTCTCCCCG GTCACGCTGG AGCACCTCGT CGCCACCTGC CCCCCGCTGC CCGTCCCGTG GCCGCCCGCC GCGCGCGAGG CGCTGCTGGA GCTGCTCGCC GCCGGGCCGG CCCAGGTCCC CGTCTGGGAG TCGCTGGACA TGGTCGGGCT CGTCGAGCGG TGGATCCCGC AGTGGACCGC GATCCGCAAC CGCCCCCAGC GCAACGCCGT CCACCGCTGG ACCGTGGACC GCCACCTCAT CGAGACCGCC GTCGGCGCCC ACCCGTTCCT GCGCGAGGTG GAGCGCCCGG ACCTGCTGCT GCTCGCCGCC CTGCTGCACG ACCTCGGCAA GCTGCCCGGC GCCCAGGACC ACGCCCGCAC CGGGGCGCCG CTGGCGCGGG CCGTGGCCGA CCGCGTCGGG CTGGACGCCG AGGACGCCGC CGTCGTGGAG CGGCTCGTCG CCGAGCACCT CACCCTCGTC GACCTCGCCA CCCGCCGCGA CCCCGACGAC CCCCGCACCG TGGCCGCCCT CGTCGACGCC GTCGGGGGCC GGGCCGAGAC CCTGCAGCTG CTGCGGGCCC TCACCGAGGC CGACGCCCGC GCCGCCGGCC CCGCGGCCTG GTCCCCGTGG CGGGCCCGCC TCGTCGACGA CCTCGTCGCC CGCGCCCGCA AGAGCCTCGC CGGGGAGCAG GCCCCCGGCC CGGCCCCCTT CGACGAGGCC GAGCAGGCGC TCGCGGCCGC CGTCGCCGCC GACGGGGAGA GCCGCGTCGT CGTCCGCGAG GTCGACGGGT TCTTCGTCGT CACCGTCGTC ACCCCCGACC GCACCGGGGT CTTCGCCGAC CTCGCCGGGC TGCTGGCCGG TCACCGCTTC CTCGTGCGCT CCGCGCTCGT GCGCACCCTG GACGGGGTGG CCGTGGACTC CTGGTGGGTG GAGTCGCCCA GCGGGGAGCC GCCCTCGGCG GTCCTGCTGC GCCAGGGCCT GGAGCGGATC GTCGGCGGGG ACGTCGCCCT GCTGGAGCGG CTCGCCGCGC GCGACGCCCA GACCCCCCGC CCCGCCGGCG GGGTGCGCTC GCTGGTCGCC CACCCGCGCA TTGTCATCCT GCCCGGCGCC TCCGAGCGCG CCACCGTGCT GGAGGTCCGG GCCGCGGACC GGCCCGGGCT GCTGCACGCG CTGGGCCGCG CGCTGGCGGA GGAGGGGATC GACATCCGCT CCGCGCACGT GGCGACCTAC GCCGCCCAGG CCGTCGACGT GCTCTACCTG GCGGAGGCTT CGGGGGAGCG GTTGTCGCCC CCGCGGGTGG CCGTGGCGAT CCGGGTGCTG TCCGACGCGG CGGAGGTCCC GGGCTAG
|
Protein sequence | MRAGRPGPHR RAELVELVES RLRDVWDDAL APFAAGAPDL LGDGSGVALA CVGSLARGDC GPASDVDLVL LHDGRRLTRD DVAALADRVW YPLWDQGLRL DHSVRTAKEC REVAAADLAA GTGLLDLRVV AGDGGLVART RGHLLDDWRA GARRRLPQVL DALAERAARF GELAYLLEPD LKEARGGLRD AITLRALAAS WLTDRPHGAV DEAHTVLLDV RDGLQASSGR PGDRLVLPEQ DATAVVCGYA DADLLLAAVA QAARTISAAV DVTTRRARQS MPTRRFRAAG RRPRLRSLGH GLVEHDGEVV LGAGVSPADD PVLPLRAAAT AVRVGLPLSP VTLEHLVATC PPLPVPWPPA AREALLELLA AGPAQVPVWE SLDMVGLVER WIPQWTAIRN RPQRNAVHRW TVDRHLIETA VGAHPFLREV ERPDLLLLAA LLHDLGKLPG AQDHARTGAP LARAVADRVG LDAEDAAVVE RLVAEHLTLV DLATRRDPDD PRTVAALVDA VGGRAETLQL LRALTEADAR AAGPAAWSPW RARLVDDLVA RARKSLAGEQ APGPAPFDEA EQALAAAVAA DGESRVVVRE VDGFFVVTVV TPDRTGVFAD LAGLLAGHRF LVRSALVRTL DGVAVDSWWV ESPSGEPPSA VLLRQGLERI VGGDVALLER LAARDAQTPR PAGGVRSLVA HPRIVILPGA SERATVLEVR AADRPGLLHA LGRALAEEGI DIRSAHVATY AAQAVDVLYL AEASGERLSP PRVAVAIRVL SDAAEVPG
|
| |