Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0958 |
Symbol | |
ID | 5336260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 1324442 |
End bp | 1325248 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | helix-turn-helix- domain containing protein AraC type |
Protein accession | YP_001360710 |
Protein GI | 152964926 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0644351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00475018 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCCCGGGG TGAGCGGAAC CGACCGCGGG ATCCTCTACC CCGCCCGGCT GCCCCGGTTC ACCCGCGTCC CCGCCCCGCC GGAGGTGGGC GAACTGGTCC GGTGGTTCTG GGTCCCGCAG TGGGACGTGG CCGCGGGCCG GACCTCCCGC CAGCACCTCG TCGCCTTCCC GGCCTGCAAC CTCGTCGTGG AGAGCGGGGA CGGGGGGTTC GTCGGGTTCG CGGGGCCCAC CACGCGGCGT TCGCACCGCG ACCTCACCGG CACGGGCTGG GCGGTCGGGG CGCAGCTGCG CCCGGCGGCG GTGCCCGTGT TCACCGACGG CCCCGCGGCG CTGCGCGACC GCTACGTCCG CCTGGAGCTG CCGGGCCTGC TGGGCGCCGT CCTGGCCGCG GCGGCGGCCG GGCCCGCGGA CGCCCTGCCG CAGCGCACGG CCGCGGCGTT CGCCGGTTGG CTCGCCGCCC ACGTCGGGGA ACCGTCCGCC GAGGCGCGGA CGGCCAACGC GATGGCCGAG GTCATCGACA CCGACCCCGC CGTGGTGCGG CTGGAGGACG TCGCGCTGCG GCTGGCGGTC TCGACGCGCA CCCTGCAACG GCTCGCCCAC CGCTACGTCG GGCTGCCGCC GGCGGCGATG ATCCGCCGGC GGCGGTTGCA GGAGGCCGCC GAGCGCGTCC GGACCGACCC CTCCGCCGAC CTGGCCCGGA TCGCGGCGGA ACTCGGCTAC GCCGACCACG GGCACCTGAC CCGCGACTTC CGGGCGGTGC TGGGGATGGT GCCCAGCGAG TACCGCCGCG GCGGCGGGGC CGGCTGA
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Protein sequence | MPGVSGTDRG ILYPARLPRF TRVPAPPEVG ELVRWFWVPQ WDVAAGRTSR QHLVAFPACN LVVESGDGGF VGFAGPTTRR SHRDLTGTGW AVGAQLRPAA VPVFTDGPAA LRDRYVRLEL PGLLGAVLAA AAAGPADALP QRTAAAFAGW LAAHVGEPSA EARTANAMAE VIDTDPAVVR LEDVALRLAV STRTLQRLAH RYVGLPPAAM IRRRRLQEAA ERVRTDPSAD LARIAAELGY ADHGHLTRDF RAVLGMVPSE YRRGGGAG
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