Gene Krad_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_0958 
Symbol 
ID5336260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp1324442 
End bp1325248 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content79% 
IMG OID 
Producthelix-turn-helix- domain containing protein AraC type 
Protein accessionYP_001360710 
Protein GI152964926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0644351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00475018 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCCGGGG TGAGCGGAAC CGACCGCGGG ATCCTCTACC CCGCCCGGCT GCCCCGGTTC 
ACCCGCGTCC CCGCCCCGCC GGAGGTGGGC GAACTGGTCC GGTGGTTCTG GGTCCCGCAG
TGGGACGTGG CCGCGGGCCG GACCTCCCGC CAGCACCTCG TCGCCTTCCC GGCCTGCAAC
CTCGTCGTGG AGAGCGGGGA CGGGGGGTTC GTCGGGTTCG CGGGGCCCAC CACGCGGCGT
TCGCACCGCG ACCTCACCGG CACGGGCTGG GCGGTCGGGG CGCAGCTGCG CCCGGCGGCG
GTGCCCGTGT TCACCGACGG CCCCGCGGCG CTGCGCGACC GCTACGTCCG CCTGGAGCTG
CCGGGCCTGC TGGGCGCCGT CCTGGCCGCG GCGGCGGCCG GGCCCGCGGA CGCCCTGCCG
CAGCGCACGG CCGCGGCGTT CGCCGGTTGG CTCGCCGCCC ACGTCGGGGA ACCGTCCGCC
GAGGCGCGGA CGGCCAACGC GATGGCCGAG GTCATCGACA CCGACCCCGC CGTGGTGCGG
CTGGAGGACG TCGCGCTGCG GCTGGCGGTC TCGACGCGCA CCCTGCAACG GCTCGCCCAC
CGCTACGTCG GGCTGCCGCC GGCGGCGATG ATCCGCCGGC GGCGGTTGCA GGAGGCCGCC
GAGCGCGTCC GGACCGACCC CTCCGCCGAC CTGGCCCGGA TCGCGGCGGA ACTCGGCTAC
GCCGACCACG GGCACCTGAC CCGCGACTTC CGGGCGGTGC TGGGGATGGT GCCCAGCGAG
TACCGCCGCG GCGGCGGGGC CGGCTGA
 
Protein sequence
MPGVSGTDRG ILYPARLPRF TRVPAPPEVG ELVRWFWVPQ WDVAAGRTSR QHLVAFPACN 
LVVESGDGGF VGFAGPTTRR SHRDLTGTGW AVGAQLRPAA VPVFTDGPAA LRDRYVRLEL
PGLLGAVLAA AAAGPADALP QRTAAAFAGW LAAHVGEPSA EARTANAMAE VIDTDPAVVR
LEDVALRLAV STRTLQRLAH RYVGLPPAAM IRRRRLQEAA ERVRTDPSAD LARIAAELGY
ADHGHLTRDF RAVLGMVPSE YRRGGGAG