Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0947 |
Symbol | |
ID | 5336575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 1335010 |
End bp | 1337880 |
Gene Length | 2871 bp |
Protein Length | 956 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001360699 |
Protein GI | 152964915 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.360212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.074138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTCC TCGGCTCGTC TGGGTGGGCG GTCCGCCGAC CCGGGTTCGT CCCGGGCCGG GCTTCCCGGG CCCGAGCCTC CCCCGCTCCC CGCGGGTCCG CCACTCGGGG CGGGAGGCGG GCGGAGGACG GTCCCGGGCC CGGGCCGTCC GGCTGGGTTA GGCTCCCGGT CAGGACGGCG TCCCCGACGC GCCGGTCCCC CGACGCGCCG GTCCCCCCGA CGCAGGACCT CCGGAGGGAC CCGCTGAGAA CCGACGCCGC CGCCCGGGTG ACCCTGGACG GCTTCGCCGC CGACGTCGAC CGGGGCGCCT CCACCCGCCG GCTGCTGTCC TCCGCCCCCG TCGTCGCCCT GGACCGCCTG ACCGTCCTCG CCGCCCGCTC GCTGGACGCC CCCACCGCCC ACCTGTCCCT GCTCGGCGAG GAGCGGCACG TCGTCGCGGC GACCGGGCCC GGCGCGGACC CGCGGGGGCA CGCCGGCCCG CTGGCCGGGT CGCTGTGCGC CGCGACCGCC GTCGAGGGGC TGCCCCTGGT CGTCCCCGAC TGCGCCGCCG ACGAGCGCGT CGCGGCGCTG CCCGCGGTGC GCTCGGGAGC CGCCGGCGCC CACCTGGGCG TGCCGCTGCG CGGCCGGGAC GGCCACGTCG TGGGGGTGCT GTCCGTCTCC TCGCCGCGGC CCCGGGCCTG GGACGGCGCC GACGTCTCGA CGCTGACGAC CCTCGCCGCC GCCGCCGTGA GCGAGCTGGA ACTGTCGGCC CTGGCGGTGG AGCACCGGAC CGCCCGGGTC CGGGGGCAGC TCGCGGTCGC CGCGGGCGGG GTCGGCACCT TCGACTGGGA CCTCCTCACC GGCGAGCTGG TCTGGGACGA GCGGCTGCTG GACCTCTTCG GCTACGCCGC CGACGACTTC GGCCGCGACA TCGCCGCCTT CGAGGCCCGC CTGCACCCCG ACGACCGGTC CCGGGTCGGC GAGGCGCTGC AGCAGGCCAT CGAGACGTGC GGGCCGTTCG AGGCGGAGTA CCGGATCGTC CGCCCGGACG GTTCCACGCG CTGGGTCCAG GCCCGGGGGC AGGCGCTGCC CGACGCCTCC GGGCTCGCGG TGCGGCTGCT GGGCGCCGCC TACGACACGA CGTCCGCGCG CGACGACGAC GTCCGGGTCG CCCGGATCCT GGAGTCGATG GCCTCGGCGT TCTTCTTCCT CGACCGCGGC TGGCGCTTCA CCTACGTCAA CGCCGAGGCG GAGAAGGTGC TGGGCCGGCG CCGGGAGGAG CTGCTCGGGG GGAACGTCTG GGCCCTGTTC CCCGACGCGG TCGGCTCCGA CTTCGAGACG CACTACCGCT CCGTGGCCCG CGACGGGCGG CCGGCCACCT TCGAGGCGTA CTACCCCGCT CCGCTGGACG CCTGGTTCGA GGTCCACGCC TGGCCGGACC CGGACGGGGT GTCGGTGTAC TTCACCGACG TCACCGAGCG GCGGCGGACG CTGCTGGAGC TGGAGTCCGC CCGGGCGCAG GCGGTGGCCG CGCACGCCGC CACCACCGCC GCCGCGGCCC GGCTGCAGCT GCTGGCCACC GTGGGCGAGG ACCTCAGCGC CACGCTCGAC GTGCACGAGG CCGTCGCCCG GCTGAGCCAG CACCTGGTGC CGGCCCTGGC CGACTGGTGC CTGGTCACCC TGGTCGACGA GCACGGCGGG TTGCGCGACG TCGGCTGCCA GCACAGCGAC CCCGCCCTGC TGGACACCGT CCGCGCCTAC CGCGACGCCC GGCTGTCCGC GCTCGCCCCC GACTCCTACC TCCACGGGGT CTGGCGCACC GCCCGGCCGG TGACGATCGG CGCGGGCGCC ACGGAGGCCG TCGTCCGCCA CCTCGCCGGG GACAGCCCGG CCCGGGACCT GCTGCGGCGG CTGGCCCCGG AGGCCCTGGA GTGCCTGCCC CTGCGCGCCC ACGGGCGCAC CGTCGGGCTG CTGACCCTCT TCCACGGCGC CGAGCACGGG CCGCTGGCCC CGGCGGACCT CCTGCTGGTC ACCGAGGTCG CCGACCGCGC GGGGCTCGCG CTGGACAACG CGCGGCTGTA CTCCGCCCAG CACCGCATCG CGGAGAGCCT GCAGCGCAGC CTGCTGACCG CCCCGGTCGA GCCGGACCGG GTGCAGGTGG CGGTCCGGTA CCAGCCGGCG GCGCAGGCGG CCCGGGTCGG CGGCGACTGG TACGACGCGT TCCTCACCCC CGACGGGTCC ACCGTCCTGG TCATCGGCGA CGTCGCGGGG CACGACATCG AGGCCGCGGC GCAGATGAGC CAGGTCCGGT CCCTGCTGCG CGGCATCGCC TACGCCACGG GCGCGGGCCC GGCGACGGTC CTCTCCGGGC TGGACGCGGC GGTGAGCGGC CTGGCCGTGG CCACGACCGC CACCGTGGTC GTGGCCCGCC TGGAGCAGGA CGCCGACGAG CGCCGGCGCG GGGTCACCCG GCTGCGGTGG GCCAACGCCG GGCACCCGCC GCCGGTCCTG GTCGGCGCGG ACGGGACGGT CCGCCCGCTG GCGGTGCTCC CCCCGCAGCT GCTGCTGGGC ATCGACCCGG GCACCCACCG CGCCGACGCC GTCGTCGCCC TCGAACCCGG CTCGACCGTC CTCATGTTCA CCGACGGTCT CGTCGAGCGC CGCGACCGCG GGCTGGAGGA GGGGCTGGAG GAGCTGCAGG AGTGCGTGGC GGGGCTGGCC GGGCTGACCC TGGACGAGCT GGTCGACGGC GTCCTGGCCC GCCTGGTGCC GCCGGGCCAC GACGACGACG TGGCCCTGGT CGCGTTCCGG CTGCACCCGG TGGACGAGCC CCGTCCCGCG GAGGCCGGCC CCGCCCGGGA GCCGGACGCG GTCCTGCCCG TCCCCCGCTG A
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Protein sequence | MLLLGSSGWA VRRPGFVPGR ASRARASPAP RGSATRGGRR AEDGPGPGPS GWVRLPVRTA SPTRRSPDAP VPPTQDLRRD PLRTDAAARV TLDGFAADVD RGASTRRLLS SAPVVALDRL TVLAARSLDA PTAHLSLLGE ERHVVAATGP GADPRGHAGP LAGSLCAATA VEGLPLVVPD CAADERVAAL PAVRSGAAGA HLGVPLRGRD GHVVGVLSVS SPRPRAWDGA DVSTLTTLAA AAVSELELSA LAVEHRTARV RGQLAVAAGG VGTFDWDLLT GELVWDERLL DLFGYAADDF GRDIAAFEAR LHPDDRSRVG EALQQAIETC GPFEAEYRIV RPDGSTRWVQ ARGQALPDAS GLAVRLLGAA YDTTSARDDD VRVARILESM ASAFFFLDRG WRFTYVNAEA EKVLGRRREE LLGGNVWALF PDAVGSDFET HYRSVARDGR PATFEAYYPA PLDAWFEVHA WPDPDGVSVY FTDVTERRRT LLELESARAQ AVAAHAATTA AAARLQLLAT VGEDLSATLD VHEAVARLSQ HLVPALADWC LVTLVDEHGG LRDVGCQHSD PALLDTVRAY RDARLSALAP DSYLHGVWRT ARPVTIGAGA TEAVVRHLAG DSPARDLLRR LAPEALECLP LRAHGRTVGL LTLFHGAEHG PLAPADLLLV TEVADRAGLA LDNARLYSAQ HRIAESLQRS LLTAPVEPDR VQVAVRYQPA AQAARVGGDW YDAFLTPDGS TVLVIGDVAG HDIEAAAQMS QVRSLLRGIA YATGAGPATV LSGLDAAVSG LAVATTATVV VARLEQDADE RRRGVTRLRW ANAGHPPPVL VGADGTVRPL AVLPPQLLLG IDPGTHRADA VVALEPGSTV LMFTDGLVER RDRGLEEGLE ELQECVAGLA GLTLDELVDG VLARLVPPGH DDDVALVAFR LHPVDEPRPA EAGPAREPDA VLPVPR
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