Gene Krad_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_0947 
Symbol 
ID5336575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp1335010 
End bp1337880 
Gene Length2871 bp 
Protein Length956 aa 
Translation table11 
GC content78% 
IMG OID 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001360699 
Protein GI152964915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.360212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.074138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTCC TCGGCTCGTC TGGGTGGGCG GTCCGCCGAC CCGGGTTCGT CCCGGGCCGG 
GCTTCCCGGG CCCGAGCCTC CCCCGCTCCC CGCGGGTCCG CCACTCGGGG CGGGAGGCGG
GCGGAGGACG GTCCCGGGCC CGGGCCGTCC GGCTGGGTTA GGCTCCCGGT CAGGACGGCG
TCCCCGACGC GCCGGTCCCC CGACGCGCCG GTCCCCCCGA CGCAGGACCT CCGGAGGGAC
CCGCTGAGAA CCGACGCCGC CGCCCGGGTG ACCCTGGACG GCTTCGCCGC CGACGTCGAC
CGGGGCGCCT CCACCCGCCG GCTGCTGTCC TCCGCCCCCG TCGTCGCCCT GGACCGCCTG
ACCGTCCTCG CCGCCCGCTC GCTGGACGCC CCCACCGCCC ACCTGTCCCT GCTCGGCGAG
GAGCGGCACG TCGTCGCGGC GACCGGGCCC GGCGCGGACC CGCGGGGGCA CGCCGGCCCG
CTGGCCGGGT CGCTGTGCGC CGCGACCGCC GTCGAGGGGC TGCCCCTGGT CGTCCCCGAC
TGCGCCGCCG ACGAGCGCGT CGCGGCGCTG CCCGCGGTGC GCTCGGGAGC CGCCGGCGCC
CACCTGGGCG TGCCGCTGCG CGGCCGGGAC GGCCACGTCG TGGGGGTGCT GTCCGTCTCC
TCGCCGCGGC CCCGGGCCTG GGACGGCGCC GACGTCTCGA CGCTGACGAC CCTCGCCGCC
GCCGCCGTGA GCGAGCTGGA ACTGTCGGCC CTGGCGGTGG AGCACCGGAC CGCCCGGGTC
CGGGGGCAGC TCGCGGTCGC CGCGGGCGGG GTCGGCACCT TCGACTGGGA CCTCCTCACC
GGCGAGCTGG TCTGGGACGA GCGGCTGCTG GACCTCTTCG GCTACGCCGC CGACGACTTC
GGCCGCGACA TCGCCGCCTT CGAGGCCCGC CTGCACCCCG ACGACCGGTC CCGGGTCGGC
GAGGCGCTGC AGCAGGCCAT CGAGACGTGC GGGCCGTTCG AGGCGGAGTA CCGGATCGTC
CGCCCGGACG GTTCCACGCG CTGGGTCCAG GCCCGGGGGC AGGCGCTGCC CGACGCCTCC
GGGCTCGCGG TGCGGCTGCT GGGCGCCGCC TACGACACGA CGTCCGCGCG CGACGACGAC
GTCCGGGTCG CCCGGATCCT GGAGTCGATG GCCTCGGCGT TCTTCTTCCT CGACCGCGGC
TGGCGCTTCA CCTACGTCAA CGCCGAGGCG GAGAAGGTGC TGGGCCGGCG CCGGGAGGAG
CTGCTCGGGG GGAACGTCTG GGCCCTGTTC CCCGACGCGG TCGGCTCCGA CTTCGAGACG
CACTACCGCT CCGTGGCCCG CGACGGGCGG CCGGCCACCT TCGAGGCGTA CTACCCCGCT
CCGCTGGACG CCTGGTTCGA GGTCCACGCC TGGCCGGACC CGGACGGGGT GTCGGTGTAC
TTCACCGACG TCACCGAGCG GCGGCGGACG CTGCTGGAGC TGGAGTCCGC CCGGGCGCAG
GCGGTGGCCG CGCACGCCGC CACCACCGCC GCCGCGGCCC GGCTGCAGCT GCTGGCCACC
GTGGGCGAGG ACCTCAGCGC CACGCTCGAC GTGCACGAGG CCGTCGCCCG GCTGAGCCAG
CACCTGGTGC CGGCCCTGGC CGACTGGTGC CTGGTCACCC TGGTCGACGA GCACGGCGGG
TTGCGCGACG TCGGCTGCCA GCACAGCGAC CCCGCCCTGC TGGACACCGT CCGCGCCTAC
CGCGACGCCC GGCTGTCCGC GCTCGCCCCC GACTCCTACC TCCACGGGGT CTGGCGCACC
GCCCGGCCGG TGACGATCGG CGCGGGCGCC ACGGAGGCCG TCGTCCGCCA CCTCGCCGGG
GACAGCCCGG CCCGGGACCT GCTGCGGCGG CTGGCCCCGG AGGCCCTGGA GTGCCTGCCC
CTGCGCGCCC ACGGGCGCAC CGTCGGGCTG CTGACCCTCT TCCACGGCGC CGAGCACGGG
CCGCTGGCCC CGGCGGACCT CCTGCTGGTC ACCGAGGTCG CCGACCGCGC GGGGCTCGCG
CTGGACAACG CGCGGCTGTA CTCCGCCCAG CACCGCATCG CGGAGAGCCT GCAGCGCAGC
CTGCTGACCG CCCCGGTCGA GCCGGACCGG GTGCAGGTGG CGGTCCGGTA CCAGCCGGCG
GCGCAGGCGG CCCGGGTCGG CGGCGACTGG TACGACGCGT TCCTCACCCC CGACGGGTCC
ACCGTCCTGG TCATCGGCGA CGTCGCGGGG CACGACATCG AGGCCGCGGC GCAGATGAGC
CAGGTCCGGT CCCTGCTGCG CGGCATCGCC TACGCCACGG GCGCGGGCCC GGCGACGGTC
CTCTCCGGGC TGGACGCGGC GGTGAGCGGC CTGGCCGTGG CCACGACCGC CACCGTGGTC
GTGGCCCGCC TGGAGCAGGA CGCCGACGAG CGCCGGCGCG GGGTCACCCG GCTGCGGTGG
GCCAACGCCG GGCACCCGCC GCCGGTCCTG GTCGGCGCGG ACGGGACGGT CCGCCCGCTG
GCGGTGCTCC CCCCGCAGCT GCTGCTGGGC ATCGACCCGG GCACCCACCG CGCCGACGCC
GTCGTCGCCC TCGAACCCGG CTCGACCGTC CTCATGTTCA CCGACGGTCT CGTCGAGCGC
CGCGACCGCG GGCTGGAGGA GGGGCTGGAG GAGCTGCAGG AGTGCGTGGC GGGGCTGGCC
GGGCTGACCC TGGACGAGCT GGTCGACGGC GTCCTGGCCC GCCTGGTGCC GCCGGGCCAC
GACGACGACG TGGCCCTGGT CGCGTTCCGG CTGCACCCGG TGGACGAGCC CCGTCCCGCG
GAGGCCGGCC CCGCCCGGGA GCCGGACGCG GTCCTGCCCG TCCCCCGCTG A
 
Protein sequence
MLLLGSSGWA VRRPGFVPGR ASRARASPAP RGSATRGGRR AEDGPGPGPS GWVRLPVRTA 
SPTRRSPDAP VPPTQDLRRD PLRTDAAARV TLDGFAADVD RGASTRRLLS SAPVVALDRL
TVLAARSLDA PTAHLSLLGE ERHVVAATGP GADPRGHAGP LAGSLCAATA VEGLPLVVPD
CAADERVAAL PAVRSGAAGA HLGVPLRGRD GHVVGVLSVS SPRPRAWDGA DVSTLTTLAA
AAVSELELSA LAVEHRTARV RGQLAVAAGG VGTFDWDLLT GELVWDERLL DLFGYAADDF
GRDIAAFEAR LHPDDRSRVG EALQQAIETC GPFEAEYRIV RPDGSTRWVQ ARGQALPDAS
GLAVRLLGAA YDTTSARDDD VRVARILESM ASAFFFLDRG WRFTYVNAEA EKVLGRRREE
LLGGNVWALF PDAVGSDFET HYRSVARDGR PATFEAYYPA PLDAWFEVHA WPDPDGVSVY
FTDVTERRRT LLELESARAQ AVAAHAATTA AAARLQLLAT VGEDLSATLD VHEAVARLSQ
HLVPALADWC LVTLVDEHGG LRDVGCQHSD PALLDTVRAY RDARLSALAP DSYLHGVWRT
ARPVTIGAGA TEAVVRHLAG DSPARDLLRR LAPEALECLP LRAHGRTVGL LTLFHGAEHG
PLAPADLLLV TEVADRAGLA LDNARLYSAQ HRIAESLQRS LLTAPVEPDR VQVAVRYQPA
AQAARVGGDW YDAFLTPDGS TVLVIGDVAG HDIEAAAQMS QVRSLLRGIA YATGAGPATV
LSGLDAAVSG LAVATTATVV VARLEQDADE RRRGVTRLRW ANAGHPPPVL VGADGTVRPL
AVLPPQLLLG IDPGTHRADA VVALEPGSTV LMFTDGLVER RDRGLEEGLE ELQECVAGLA
GLTLDELVDG VLARLVPPGH DDDVALVAFR LHPVDEPRPA EAGPAREPDA VLPVPR