Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0920 |
Symbol | |
ID | 5336694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 1368354 |
End bp | 1369805 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
Protein accession | YP_001360672 |
Protein GI | 152964888 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00370238 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.112136 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGGCG ACTACGACCT GGTGGTGGTG GCCAACCGGC TCCCCGTCGA CCGCGTGGAA GAACCCGACG GGTCGACGTC GTGGCGCCGC AGCCCGGGCG GGCTGGTCAC CGCCCTGGAA CCCGTGATGC AGCGCGAGGA CGGGGCCTGG GTGGGGTGGG CGGGCACGCC CGGCGACCCC CCGGAGCCCT TCGACGCCGA GGGCGTGCGG TGCGTGCCGG TCGGCCTGTC GGAGCAGGAG GTGGAGGACT ACTACGAGGG GTTCTCCAAC GGCACGCTGT GGCCGCTCTA CCACGACGTC ATCGTCGCCC CCGGCTACCA CCGCAGCTGG TGGGAGGCCT ACGTCCGGGT CAACGAGCGG TTCGCCGAGG CCGCGGCGGA GCAGGCGACC GAGGGCGCGA CGGTCTGGGT GCAGGACTAC CAGCTGCAGC TGGTCCCGCG GATGCTGCGC CGGCGCCGCC CGGACCTCTC GATCGGCTTC TTCAACCACA TCCCGTTCCC GCCGTTCGAG ATCTTCGCCC AGCTGCCGTG GCGCAAGGCC GTCATCGACG GGCTGCTGGG GGCGGACCTC ATCGGCTTCC AGCGGGCCGC GGACGCCAAC AACTTCACCC GCGCCTGCCG CCGCGCCTCG AACCTGCCCG CGCGCTCGGG CCGCATCCGG CTGGACGCCG AGGGCGGGCG GGAGGTCCGG GCGGCGTCGT TCCCCATCTC CATCGACTTC GCCGCCCTGG ACGAGCTCGC CGAGCGCGAG GACGTGAAGG CGCGGGCGGC GGAGATCCGC CGCGACCTGG GCAACCCCGA GCACGTCCTG CTGGGGGTGG ACCGCCTCGA CTACACCAAG GGGATCCTGC ACCGGCTGAA GGCCTTCGAG GAGCTGCTGG ACGACGGGGG CGTGAAGGTC GAGGAGGCCT CGCTGATCCA GGTCGCCACC CCCAGCCGGG AACGGGTCGA GCAGTACGTC CAGCTCCGCC AGGACGTCGA GGTCACCGTC GGGCGCATCA ACGGCACCCA CGGCACCATC AAGAACACCG CCGTCCACTA CCTGCACCAC TCCTACGGGC GCGAGGAGAT GGCGGCGCTG TTCCTGGCCG CGGACGTCAT GCTCGTGACG GCGCTGCGCG ACGGCATGAA CCTCGTCGCC AAGGAGTACG TCGCCTCCCG CCACGACGAG CGCGGGGTGC TGGTGCTCAG CGAGTTCACC GGCGCCGCGG ACGAGCTCGG CCAGGCGCTC ATGATCAACC CGCACGACAT CGACGGCCTC AAGGACGCGA TCCTGCGCGC GCTGCGGATG TCCCCGCGCG AGGCCGGGCG GCGGATGCGC TCGCTGCGGC GGCGCGTGGG CGACCACGAC GTGCAGCGGT GGGCGGCCTC GTTCCTGCAG GCGCTGGCCG ACCACCACAC CACCGAGGCC GCCGTCTCGG TGGCCGCGGC GGCGGAGCGG GGCTCGTCGT GA
|
Protein sequence | MAGDYDLVVV ANRLPVDRVE EPDGSTSWRR SPGGLVTALE PVMQREDGAW VGWAGTPGDP PEPFDAEGVR CVPVGLSEQE VEDYYEGFSN GTLWPLYHDV IVAPGYHRSW WEAYVRVNER FAEAAAEQAT EGATVWVQDY QLQLVPRMLR RRRPDLSIGF FNHIPFPPFE IFAQLPWRKA VIDGLLGADL IGFQRAADAN NFTRACRRAS NLPARSGRIR LDAEGGREVR AASFPISIDF AALDELAERE DVKARAAEIR RDLGNPEHVL LGVDRLDYTK GILHRLKAFE ELLDDGGVKV EEASLIQVAT PSRERVEQYV QLRQDVEVTV GRINGTHGTI KNTAVHYLHH SYGREEMAAL FLAADVMLVT ALRDGMNLVA KEYVASRHDE RGVLVLSEFT GAADELGQAL MINPHDIDGL KDAILRALRM SPREAGRRMR SLRRRVGDHD VQRWAASFLQ ALADHHTTEA AVSVAAAAER GSS
|
| |