Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0908 |
Symbol | |
ID | 5337491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1380773 |
End bp | 1381834 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_001360660 |
Protein GI | 152964876 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00327359 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0207813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCTCGA CCGTTTCCCC GACGAACCAC CGGAGCCCGG GAACCGGCGG TGGCGAGAGC ACCGCCACCG TCCTGGTCGC CCTCGGCGCC AACGCCCTCA TCGCCGTCGC CAAGGGCGTC GCGGCGGTCG TCACGGGCTC CGCGGCCATG GCCGCGGAGA CCGCGCACTC GGTGGCCGAC ACCGTCAACG AGGTGTTCCT GCTGACGGCC CTGCGCACCA GCGCCCGCCC CGCCGACCGC GAGCACCCCC TCGGCTACGG CCGGGCCCGC TACTTCTGGG CCCTGGTCGC CGCCGGCTCG ATCTTCGTCA CCGGCGCGCT GTACTCCGCC TACGAGGGCG TGGAGGCGCT GACGTCGGAG TCGCACGACC TGGAGAGCCC GCTGGTCTCC TACGTCGTGC TGGCCGTCGC CTTCGTCCTG GAGGGCTCCT CGCTGCTGAA GGGCCTGAAG CAGACGCGGG GGGAGGCCCG GGAGAAGCGG CAGGGCTTCC GCGAGTTCCT GCGCACCACC GACGACCCCA CCGCGACCAC GGTCGTGTTC GAGGACAGCG CCGCGCTGGC CGGGCTGCTG CTGGCCGGCG CGGGCACCGC GATGCACCAG GTCACCGGCT CGGGGGTCTA CGACGGGATC GCCAGCCTCT GCATCGCGCT GCTGCTGGCC CTCGTCGCGG TCCGGCTGGC ACGGACGAAC ATGCGCCTGC TCACCGGGGT CCAGGCCGAT CCGCGGCTGG TGAGCTCCGT CCTCGTCCAC CTCGGCGACG AGCCGGAGGT CGAGGCGGTG GTGGACCTGC TGACGGTCCA GCTGGGCACC GACCAGGTCC TGGTCTGCGC CCGCCTGGAC CTCGTCGACA CCCTGACCGG CGCCGAGGTG GAGCGGGCCA CCGTCCGCAT CGGCCGCACG CTGCGCGAGC GGTTCCCCGA CGTCGCCGAG GTGTTCCTCG AGCCGGTGCC GCAGGGCGAC GCCGAGGTGC GCGGGCGCGT GCGCGAGCGC TACGGCGCCG AGCTCGCCGA CCGGATCGTC GCCGAGGCCG CCGACGACCG GCCGGGGTCC GCCCCGTCCT GA
|
Protein sequence | MSSTVSPTNH RSPGTGGGES TATVLVALGA NALIAVAKGV AAVVTGSAAM AAETAHSVAD TVNEVFLLTA LRTSARPADR EHPLGYGRAR YFWALVAAGS IFVTGALYSA YEGVEALTSE SHDLESPLVS YVVLAVAFVL EGSSLLKGLK QTRGEAREKR QGFREFLRTT DDPTATTVVF EDSAALAGLL LAGAGTAMHQ VTGSGVYDGI ASLCIALLLA LVAVRLARTN MRLLTGVQAD PRLVSSVLVH LGDEPEVEAV VDLLTVQLGT DQVLVCARLD LVDTLTGAEV ERATVRIGRT LRERFPDVAE VFLEPVPQGD AEVRGRVRER YGAELADRIV AEAADDRPGS APS
|
| |