Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0900 |
Symbol | ispF |
ID | 5334091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1392549 |
End bp | 1393028 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_001360652 |
Protein GI | 152964868 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00577848 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAGCGGCC TGCCCCGCGT GGGGACCGGG GTCGACGTCC ACCAGCTCGT GGCCGGTCGC CCCTGCTGGG TCGCCGGGCT GCTCTGGGAG GGCGAGGCGG CCGGGCCCGA GGGCCACTCC GACGGCGACG TCGCGGCCCA CGCCTGCTGC GACGCGCTCT TCGCCGCCGC CGGTCTCGGC GACCTCGGCG CGCACTTCGG CACCGCCCGC CCCGAGTTCG CCGGGGCCTC CGGGGCCCGG CTGCTGGCCG AGGCGGCGCG GCTGGTGCGC GAGGCCGGTT TCGAGATCGG CAACGTCTCC GTGCAGGTCG TCGGCAACCG GCCCAAGGTC GGGCGCCGCC GCGCCGAGGC CCAGGCCGCG CTGAGCCGGG CGTGCGGCGC ACCCGTCTCC GTGGCCGGCA CGACCACCGA CGCGCTGGGC CTGACCGGGC GCGGCGAGGG CATCGCGGCT ATCGCCACCG CGCTCGTCGT CCCCCGCTGA
|
Protein sequence | MSGLPRVGTG VDVHQLVAGR PCWVAGLLWE GEAAGPEGHS DGDVAAHACC DALFAAAGLG DLGAHFGTAR PEFAGASGAR LLAEAARLVR EAGFEIGNVS VQVVGNRPKV GRRRAEAQAA LSRACGAPVS VAGTTTDALG LTGRGEGIAA IATALVVPR
|
| |