| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0347 |
|---|
| Symbol | |
|---|
| ID | 5333780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 1964397 |
|---|
| End bp | 1966568 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_001360101 |
|---|
| Protein GI | 152964317 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGGAG CCGCGATTAC GCTCCTCCCG ATGGACGGGA CCAGATCCGC CTTCGCCGGC
GACCTCCTCA CCGGCGGAGC CGCCGTCGCG GGACTGCCCC GCGTCGTGCA GGGGCAGCCG
GGGGCAGTCC TCCTCGTGCA CGTCGCCGAG GGGACGGTCC TCTTCGCCAA CCCCCTCGCC
GAGCAGCTCG CCCCGCGCAC CGCGCTGCCC TGCAGCGTCG ACGACTGGTC GCGCGCGGCG
GGCCTGGAGT CCACCGCCGG CGACGACATC ACCGACCCGG CCAACGCCGC CTCCCCCCTC
TCCCGCATCG CCCGCGGCGA GCCCGTGCAC GGCGAGCGCG TCACCGCCGC CCGCTCCTCG
GACATGTCCG AGGAGCGCGA GGCGCTGTGG GTCATCGGGC TGCCGATGAA CGACGCCCCC
GTCGACGAAC TGTCCTCCCT CGCGCTGGTG GTGCTGCTGC CGCTGCGCGA GGAGGGGATG
GTCCGCGAGG CCCAGGAGTC CGCCGAGCGC CTGCACAGCC GCGCCGTGCT GGCCAGCGAC
CTGTCCTTCA CCATCTCCGA CCCCACCAAG CCCGACAACC CCCTGGTCTG GACGAACCCC
GCCTTCGAGC GGGTCACCGG CTACGGCCGC GAGGTCCTGG GCCAGAACTG CCGCTTCCTG
CAGGGCCCCG GCACCGACCG CGAGGCCGTG GCCCGGATCC GGCGCGCCCT GGAGACCGGG
GACACCGTCA CCGAGCTCTT GCTCAACTAC CGCAAGGACG GCACGGCCTT CTGGAACGAG
GTCGTCATCT CCCCCGTGCA CGACGCGGAC GGGCGGCTGA CCCACTTCGT CGGCGTGCAG
TCCGACGTCA CGCTGCGGGT GCAGGCCGAG CGCGAGCGCG ACGCGGCCCT CCTCGACGCC
CGCGACGCCC GTCACCGCCT GGAGTTCCTC TCCTCGGTCA CCGACCGGCT CTCCGAGGTC
CTGGACCCCG ACACCGCCCA GGACCTCCTG CCCTCGCTGG TCGTCCCCGA CTTCGCGGAG
TGGGCGTTCG CCACGCTGCT CGACGGCAAC GGGCGGGCCC GCCACGTCCG GGCCTCGCAC
GCGAACCCGG CGCTGGCCAC CGACGTCGAG CGGTTCCAGG ACCTGCACAC CGCGCTGGGC
GAGGAGTCGA TCTCGCTGCA GGTGCTGCGC GGGAGACTGG GCCCGACGCT GGTGACCGTC
CGCGACCGCC ACCTCGAGAC CGGGGTCACC ACCGCGGAGG CCGCCACCCT GCTGCGCCGC
CTCGGCCTGG GCAGCGCCAT CGTCGTCCCG CTGCGCGCGC GGGGGGAGGT GAGGGGTTCG
CTGACCCTGC TCTCCGGCCC GGACCGGCCC CCCTTCACCG AGGACGACCT GGCCACCGCC
ACCGACCTCG GCGCCCGCGC CGGGGTCGCG CTGGAGAACG CCCGCCTCTA CGCCCAGCAG
CGGCAGTCCT CGGAGACGCT GCAGCGCAGC CTGCTGAGCC CGCCGACGCG GTCGGCGGGC
CTCTCGATCG CGACGCGGTA CCACCCCGCC GCCGAGGCCG CGCAGGTCGG CGGCGACTGG
TACGACGCCT TCACCCAGCC CGACGGCTGC ACCGTCGTCG TCATCGGCGA CGTGATGGGG
CACGACGTGT CCGCCGCCGC CGCGATGGGC CAGCTGCGGA CGCTGGTGCG CGGGCTGGCC
TACGACCGCT CCGCGCAGCC GGACGAGGTC CTGCGCCGCC TGGACCGGCT GCTGGCCGGG
CTGGGGCTGA CGACGCTGGC CACGGCGATC GTGCTGCAGC TGGACGCCCT CGCGCCCGAC
GGCACCGGGG ACGGCAGCCG CGGGATCCGC TGGTGCACCG CCGGCCACCT GCCGCCCGTG
GTGGCCGAAC CGGACGGCTC GGTGCGGCTG CTGCCCGGCG AGGGGATCGT CCTGGGCCTC
GGCGCCGGGC AGGACCGCGT CCAGCAGGAG GCGCGGCTGG CGCTGGGCTC GACGCTGCTG
CTCTACACCG ACGGGCTGGT GGAGCGGCGC GACCAGTCCA TGGAGGTCCG CCTCGCCGAG
CTGCGCGAGG CCGTGGCCGA CCTCGGGAAC CAGCCGGTCG AGGCGCTGTG CGACGGGCTG
GTGGAGCGGA TGCTGCCGAA GGGCAGCGAC GACGACGTCG CCATCGTCGC GGTCCGCGTC
GTCGAGGTCT GA
|
|---|
| Protein sequence | MSGAAITLLP MDGTRSAFAG DLLTGGAAVA GLPRVVQGQP GAVLLVHVAE GTVLFANPLA
EQLAPRTALP CSVDDWSRAA GLESTAGDDI TDPANAASPL SRIARGEPVH GERVTAARSS
DMSEEREALW VIGLPMNDAP VDELSSLALV VLLPLREEGM VREAQESAER LHSRAVLASD
LSFTISDPTK PDNPLVWTNP AFERVTGYGR EVLGQNCRFL QGPGTDREAV ARIRRALETG
DTVTELLLNY RKDGTAFWNE VVISPVHDAD GRLTHFVGVQ SDVTLRVQAE RERDAALLDA
RDARHRLEFL SSVTDRLSEV LDPDTAQDLL PSLVVPDFAE WAFATLLDGN GRARHVRASH
ANPALATDVE RFQDLHTALG EESISLQVLR GRLGPTLVTV RDRHLETGVT TAEAATLLRR
LGLGSAIVVP LRARGEVRGS LTLLSGPDRP PFTEDDLATA TDLGARAGVA LENARLYAQQ
RQSSETLQRS LLSPPTRSAG LSIATRYHPA AEAAQVGGDW YDAFTQPDGC TVVVIGDVMG
HDVSAAAAMG QLRTLVRGLA YDRSAQPDEV LRRLDRLLAG LGLTTLATAI VLQLDALAPD
GTGDGSRGIR WCTAGHLPPV VAEPDGSVRL LPGEGIVLGL GAGQDRVQQE ARLALGSTLL
LYTDGLVERR DQSMEVRLAE LREAVADLGN QPVEALCDGL VERMLPKGSD DDVAIVAVRV
VEV
|
|---|
| |