Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0173 |
Symbol | |
ID | 5334651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 2142310 |
End bp | 2144880 |
Gene Length | 2571 bp |
Protein Length | 856 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_001359928 |
Protein GI | 152964144 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.114207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCA CCCCCGCCCC CGCCACCGCG ACGCCCCACC TGCCCGACCT GCTGCCGCCC CCGGGCACCG ACGACCCCGA CGGCGTCTAC GAGGCGTTCT CGACGTGGGT GACCTCGCGC GGCATCGAGC TGTACCCCGC GCAGCAGGAC GCGCTCATCG AGGTGGTCGC CGGCTCCAAC GTCGTGCTCG CGACCCCCAC GGGCTCGGGG AAGTCGCTGG TGGCCGCCGG GGCGCACGCC GCGGCGCTGA GCGCGGGGAT CCGCTCCTTC TACACGGCCC CGCTCAAGGC GCTGGTGAGC GAGAAGTTCT TCGCCCTCGT CGAGACGTTC GGCGCCGAGC GGGTCGGCAT GATGACCGGC GACGCGTCGG TGAACCCGGG CGCGCCGATC GTCTGCTGCA CCGCGGAGGT CCTGGCCAAC GTCGCGCTGC GCTCCGGCGC GTTCGCCGAC GTCGGGCAGG TCGTCATGGA CGAGTTCCAC TTCTACGCCG ACCCCGACCG CGGCTGGGCC TGGCAGGTCC CCCTCGTCGA GCTCCCGCAG GCGCAGTTCC TGCTGATGTC GGCGACGCTG GGCGACACGA CGGCGCTGCG CGAGGACCTG ACCCGGCGCA CCGGGCGGGC CACGGCCAGC GTCACCTCGG TGGAGCGGCC CGTGCCGCTG CACTACTCCT ACGCCACGAC CCCGCTGCAG GAGACCGTCG AGGAACTCCT GCACACCGAC CGCGCCCCCG TCTACGTCGT GCACTCCACC CAGGCCGCGG CCGTGGAGCA GGCCCAGTCG CTGACCAGCG CGAAGATCGC CACCCGCGAG CAGCGCGACG CGATCGGCGA GGCCCTCGGC GGGTTCCGGT TCGCCGCCGG CTTCGGCAAG GTCCTCAACC GGCTGCTGCG GATGGGCGTC GGCGTCCACC ACGCCGGGAT GCTGCCCAAG TACCGGCGCC TGGTGGAGAC CCTCGCCCAG GCCGGGCTGC TCAAGGTCAT CTGCGGCACC GACACCCTCG GCGTCGGGAT CAACGTCCCC ATCCGCACCG TCCTGTTCGC CGGCCTCACC AAGTTCGACG GCCGCCGCAA CCGGCACTAC CGCGTCCGGG AGTTCCACCA GATCGCCGGG CGCGCCGGCC GCGCCGGGTT CGACACCGCC GGCACCGTCG TCGTCCAGGC CCCCGAGCAC GAGGTGGAGA ACGCCCGCCG CGTCGCCCGG GCCGGGGACG ACCCGAAGAA GCTCAAGCGC GTCCAGCGGG TCAAGGCGCC GGAGGGTTTC GTCTCCTGGT CGCAGCAGAC GATGGACAAG CTCGTCGCGG GCGAACCCGA GCAGCTCACC TCCCACTTCC GGGTCACGAC CTCCATGCTG CTGAACGTCC TGCAGCGCCC GGGGAACCCG GTCGAGGCGA TGCGCCACCT GCTGCTGCAG AACCACGAAC CCCGCAAGAA CCAGCTCAAG CACGTCCGCC GCGCCGTGGA GCTGTTCCGC GCCCTCCTCG ACGCCGGCAT CGTCGAGACG CTGCCCGAAC CCCTGCCCGA CGGGCGGCAG GTGCGGCTGG TGGGCGACCT GCAGCTGGAC TTCGCCCTCA ACCAGCCGCT GTCGCCGTTC GCGCTCGCCG TCATCGACGA GCTCCTCGAC CCCGCGTCCC CGACCTACGC CCTCGACGTC GTGTCGGTCA TCGAGTCCAC CCTGGACGAG CCGATGAAGG TCCTGCTCGC GCAGCGCTCC AAGGCCAAGG GCGACGCCGT GCAGCGCATG AAGGCCGACG GTGTCGAGTA CGAGGAGCGC ATGGAACTGC TCGAGGACGT CGAGTGGCCG CAGCCGCTGG CGGAGGAGCT GCGCGCCGCC TACGAGACCT ACCGCGCCGG GAACCCCTGG GTCGGCGACT ACGAGGTGAA GCCCAAGTCC GTCGTGCGCG ACATGTACGA GCGGGCCATG ACGTTCGGCG ACTACGTCCA GCACTACCAG CTGGCCCGGT CGGAGGGCCT CGTCCTGCGC TACCTCTCCG ACGCCTACAA GGCGCTGAAG CAGACCGTGC CCGACGACGC CCGCACCGAG GAGCTCACCG ACCTCGTGGA GTGGCTGGGC GAGGTCGTGC GCCAGACCGA CTCCTCCCTG CTGGCCGAGT GGGAGGCGCT GCGCGACGGC GTCGACCCCG CCGACGTCCA GGACGCCGTC GTCCGCGAGG AGGAGGCCCC GCCGGTCACC GCGAACACCC GCGCGTTCCG CGTGCTGGTG CGCAACGCGG TGTTCCGGTT CGTGGAGCTG TGCGCGCTGG ACCGCCCCGC CGCCCTGGCG GAGCTGGAGG GTTCCCCCGA CGAGAGCACC TGGGCCGACC AGCTCGACGC CTACTACGAG GAGCACGACA GCATCGGGAC CGGGCCCGAC GCCCGCGGGC CGCACCTGCT CCAGGTCGAC GACGGGTCCG GCCCCGAGCC GAAGGGCTCG GCGCGCCGCT GGTACGTGCG CCAGGTGCTG GAGGACCCCG CGGGCGACCG CGACTGGGCG ATCGTCGCCG AGGTCGACCT CGACGCCTCC GACGAGGCCG GCACCGCGGT GCTGCAGGTC GCGGGGCTGC TGCGCCTCTG A
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Protein sequence | MTATPAPATA TPHLPDLLPP PGTDDPDGVY EAFSTWVTSR GIELYPAQQD ALIEVVAGSN VVLATPTGSG KSLVAAGAHA AALSAGIRSF YTAPLKALVS EKFFALVETF GAERVGMMTG DASVNPGAPI VCCTAEVLAN VALRSGAFAD VGQVVMDEFH FYADPDRGWA WQVPLVELPQ AQFLLMSATL GDTTALREDL TRRTGRATAS VTSVERPVPL HYSYATTPLQ ETVEELLHTD RAPVYVVHST QAAAVEQAQS LTSAKIATRE QRDAIGEALG GFRFAAGFGK VLNRLLRMGV GVHHAGMLPK YRRLVETLAQ AGLLKVICGT DTLGVGINVP IRTVLFAGLT KFDGRRNRHY RVREFHQIAG RAGRAGFDTA GTVVVQAPEH EVENARRVAR AGDDPKKLKR VQRVKAPEGF VSWSQQTMDK LVAGEPEQLT SHFRVTTSML LNVLQRPGNP VEAMRHLLLQ NHEPRKNQLK HVRRAVELFR ALLDAGIVET LPEPLPDGRQ VRLVGDLQLD FALNQPLSPF ALAVIDELLD PASPTYALDV VSVIESTLDE PMKVLLAQRS KAKGDAVQRM KADGVEYEER MELLEDVEWP QPLAEELRAA YETYRAGNPW VGDYEVKPKS VVRDMYERAM TFGDYVQHYQ LARSEGLVLR YLSDAYKALK QTVPDDARTE ELTDLVEWLG EVVRQTDSSL LAEWEALRDG VDPADVQDAV VREEEAPPVT ANTRAFRVLV RNAVFRFVEL CALDRPAALA ELEGSPDEST WADQLDAYYE EHDSIGTGPD ARGPHLLQVD DGSGPEPKGS ARRWYVRQVL EDPAGDRDWA IVAEVDLDAS DEAGTAVLQV AGLLRL
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