| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2542 |
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| Symbol | |
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| ID | 8381695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2731663 |
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| End bp | 2733141 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645005307 |
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| Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
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| Protein accession | YP_003162477 |
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| Protein GI | 256833750 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR02692] tRNA adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.277933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTCGC ACAACCCAGC ACCACGACTT GATCGAGACC TCCTCCTTCG CCGAGTCACC
GCCGTCCTGG AGCACATGAA CCCCACCGTG ATAGAACTCG GCGAGCTCTT TCACGCTGCG
GGACACGAAC TTGCCATTGT GGGCGGACCG GTGCGTGACG CGTTGCTGGG GCGGACTTCC
CATGATCTCG ATTTTGCGAC GAGTGCTAGC CCGGATGAGA CCGAAGCGCT GCTACGGACG
TGGGGTGACA GTCACTGGGA TATCGGAAAA GAGTTCGGCA CCATCGGGGC GATGCGTCAC
GGCGTCAACG GCAGTGACGA CATTGTCGTA GAAATCACCA CATACCGTAC TGACAAGTAT
GATCCCACCT CACGAAAACC GTTGGTCGCG TTCGGGGACA CCCTCGACGG TGACCTGTCT
CGACGTGACT TCACCGTGAA TGCGATGGCT ATTCGCCTTC CTGAGCTCAC CTTCGCTGAC
CCATTTGATG GACTCAATGA CCTATCTCAT GGGCTACTTC GCACCCCCAT TCGCCCTGAG
CAGTCCTTTG ATGACGACCC ACTGCGGATG ATGCGTGCTG CACGTTTTGC TGCGCAGTTG
GGCTTCACCG TAGAACCGGA CGCGTTCGCT GCTATTGCTG CCATGGCAGG GCGGATCAGT
ATTGTGTCGG CAGAACGTGT TCGGGACGAA TTAACCAAAC TGATGCTCAG TGCCCACCCA
GTGACTGGCC TTGAGGTCCT GGTGAACACT GGGCTTGCAC ATCATGTCAT CCCTGAGGTT
CCCGGGATGA AAGAAGCAAG CGATGAACAC AACCGGCACA AAGATGTGTA TGCCCACACG
ATGACGGTGA TCCAACAGGC CATCGACCTT GAGACTGGTC CTGACGGACC CGTTCCAGCC
CCTGACCTTG TGTTACGGTT CGCGGCGTTG ATGCATGACG TTGGGAAGCC TGCGACCCGA
AAATTTGAAC CCAATGGCAC AGTGTCTTTC CACCACCATG AACTTGTTGG CGCGAAAATG
ACCGCAAAAA GGTTGCGTGC CCTGCGGTTT GACAAAGACA CGATCAAGTC GGTGTCTCGG
CTTGTGGAAC TTCACCTTCG GTTCCATGGG TACGGTGAAG GTGCGTGGAC GGATTCGGCG
GTTCGCCGTT ATGTCACCGA TGCGGGGCCT CACCTGGAGC GGCTGCACCG GTTGACCCGC
GCTGACTGTA CGACCCGCAA CAAGAACAAG GCCCGCCGTT TGTCGCGTGC CTACGATGAT
CTTGAACAAC GCATTGTTGC GTTGCGGGAA CAAGAGGAAA TTGATGCGAT CCGCCCTGAC
CTGAATGGCG AACAGATCAT GGACATCCTT GGGATTGCTC CAGGGCGTGA GGTGGGACTC
GCGTACAAAT ACTTACTTGA ACTTCGGATG GATGAAGGCC CACTGGATGA GGACACTGCC
AAGGAGCGTC TCCTTCAGTG GTGGGCACAA CACAACTAA
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| Protein sequence | MTSHNPAPRL DRDLLLRRVT AVLEHMNPTV IELGELFHAA GHELAIVGGP VRDALLGRTS
HDLDFATSAS PDETEALLRT WGDSHWDIGK EFGTIGAMRH GVNGSDDIVV EITTYRTDKY
DPTSRKPLVA FGDTLDGDLS RRDFTVNAMA IRLPELTFAD PFDGLNDLSH GLLRTPIRPE
QSFDDDPLRM MRAARFAAQL GFTVEPDAFA AIAAMAGRIS IVSAERVRDE LTKLMLSAHP
VTGLEVLVNT GLAHHVIPEV PGMKEASDEH NRHKDVYAHT MTVIQQAIDL ETGPDGPVPA
PDLVLRFAAL MHDVGKPATR KFEPNGTVSF HHHELVGAKM TAKRLRALRF DKDTIKSVSR
LVELHLRFHG YGEGAWTDSA VRRYVTDAGP HLERLHRLTR ADCTTRNKNK ARRLSRAYDD
LEQRIVALRE QEEIDAIRPD LNGEQIMDIL GIAPGREVGL AYKYLLELRM DEGPLDEDTA
KERLLQWWAQ HN
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