Gene Jden_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2518 
Symbol 
ID8381671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2703510 
End bp2704313 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content58% 
IMG OID645005283 
ProductTetratricopeptide TPR_4 
Protein accessionYP_003162453 
Protein GI256833726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.90671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGC GCCTGCACAA GCAGGTGGGG AAGACAAAAG TTGCAGCCAT GAGTCAATCT 
GACGTTTCAC CAGAAAACCC TGCGCAGCTC GCGGAAGCAT CCGTGCGTCG CGCAGTGGAT
GCCCTCCAGC AGGGTGCAGG ACAGTATGAC GGCAGCGCAG TTGAGGCAAT GAAGCAAGCG
CGCGCCTTCT TCAACTCCCA AAACCTCTAC GCACAGGCAG CCACCTGCGC CATGAACCTC
GGTGACCACT TCTGGAAGAA AGAAGACATC ACCCGAGCAA ATGACTACTA CGAGGCAGCT
CGCAACGAGT TCGCTCTTGC TGATCTCGAC CGGCAAACCG CGGACGCCAC CATGAACCTC
GCCATGGTGC TGTGGAAGGA AGGCGACCTC GGCCGAGCCC GCACCCTCTA CCTCGAAGCC
CTGAACTTCT TCACATCCCA ATCCCTTGAC CACGACATGG CCTCCGTGAA GGTGTCGCTG
GGTGGGGTGC ACGAGTCAGC TGGCGAACAC GACCTCGCTC TTGCCGCTTA CCGTGACGCG
CTTGCTTACT ACGAGAAGCA CGATAATGCG AAGCGTGTCG ACCAGTGCCG TGCCGGTATT
GGTCGGGTGC TGCTGTACGA CGACAAGTTC GACGACGCAG AACCTTACTT CACCGCCGCA
TCGACTGGTT TCAAAGACCG TGAAGAAACC AAACAGTACG GTGACTGCCT TGTTGCGCTG
GCGGACATCT ACCACGCTCA GGGGCGTAAT GACGATGCGC GCCGCACCTT TGAAGAGGCA
CGCCGAGTGT TCGCAATCAA ATAA
 
Protein sequence
MPTRLHKQVG KTKVAAMSQS DVSPENPAQL AEASVRRAVD ALQQGAGQYD GSAVEAMKQA 
RAFFNSQNLY AQAATCAMNL GDHFWKKEDI TRANDYYEAA RNEFALADLD RQTADATMNL
AMVLWKEGDL GRARTLYLEA LNFFTSQSLD HDMASVKVSL GGVHESAGEH DLALAAYRDA
LAYYEKHDNA KRVDQCRAGI GRVLLYDDKF DDAEPYFTAA STGFKDREET KQYGDCLVAL
ADIYHAQGRN DDARRTFEEA RRVFAIK