Gene Jden_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2512 
Symbol 
ID8381665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2698122 
End bp2699033 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID645005277 
ProductABC transporter related 
Protein accessionYP_003162447 
Protein GI256833720 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.166295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.98268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCG TTGAGAACGT CACCAAAACC TTTGGCGGGA CTCGCGCACT GACCAACGTG 
TCGCTGACCG CGAAACCCGG CCGCATCACC GGGTTCCTCG GCCCCAACGG GGCCGGAAAA
TCCACCGCAA TGCGCATCAT CTGCGGACTC GCACGCCCAG ACAGCGGCAC AGCACTCGTT
GAAGGCGTCC CCTACGCCCA CCTGCCCAAC CCGGCACGAC GGGTCGGGGC GCTCCTGGAC
GCTTCCGCCC ACCACGACGG GCGCACCGGT CTGGAAACCC TCACCCTGGC CGCAATCGCC
CTCGGGATCC CCCGCACCCG CGTCACAGAG GTGATCGCGC TTGTCGGGCT CACCCCCAAA
GAAGCGCGCC GCCGCGTCGG AACCTACTCC CTGGGTATGC GTCAACGCCT CGGCATCGCC
ACCGCGCTCC TACCCGACCC GCGCATTCTC ATCCTCGACG AACCCGTCAA CGGCCTGGAC
CCCTCCGGAA TCCGGTGGAT GCGTGACCTG CTACGCCACT TCGCCGACGA CGGAGGCACC
GTCCTGCTGT CCTCCCACCT CCTCATGGAA ATTGAGGCAG TCGCAGACGA CATCATTGTG
ATCGGGAACG GGCAGATCGT TGCGCAAGGC GCAAAAGAAG ACCTCCTGCG CGGTTCCTCC
ACATCCGTGA GCGCACTGAG TATCGACCCG CTGCGCTCCG CGCTCCTCAC CGCAGGACAC
ACCGCCGACA CCGTCGGCCC CCACAGTGTG ACCACCTCGG CTGACCCCGA AACCGTGGGA
CGGCTCGCAC TTGACCACCA GATTGTCCTC ACCGGGCTGC ACCAACAGTC CTCAGGCACC
CTCGAAGACC TGTTCTTCTC CCTGACCTCC AACCACGACC GCACCGTCAC ACCACAAGGG
GCGCCCTCAT GA
 
Protein sequence
MITVENVTKT FGGTRALTNV SLTAKPGRIT GFLGPNGAGK STAMRIICGL ARPDSGTALV 
EGVPYAHLPN PARRVGALLD ASAHHDGRTG LETLTLAAIA LGIPRTRVTE VIALVGLTPK
EARRRVGTYS LGMRQRLGIA TALLPDPRIL ILDEPVNGLD PSGIRWMRDL LRHFADDGGT
VLLSSHLLME IEAVADDIIV IGNGQIVAQG AKEDLLRGSS TSVSALSIDP LRSALLTAGH
TADTVGPHSV TTSADPETVG RLALDHQIVL TGLHQQSSGT LEDLFFSLTS NHDRTVTPQG
APS