Gene Jden_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2228 
Symbol 
ID8381386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2414505 
End bp2415716 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content61% 
IMG OID645004988 
Productglycoside hydrolase family 5 
Protein accessionYP_003162168 
Protein GI256833441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCTG CACGAGCAAT CGCCGCCGCA CTCGCACTCG CGAGCACGGC AGCATTCACC 
GCCCCCGTCA GTGCCGCATC GGCAGCCACA CCCGACGGAA TCCACGTCAA AGACGGGCGC
ATCTACGAAG CTGACGGCAC CGAACTCATC CTGCGTGGCG TCAACCACGC CCACGCCTGG
TACAACAACG AAACAGGTGC CTACGCCGAC ATTGCCCACG CCGGTGCCAA CTCCGTGCGA
ACCGTCCTCT CCAACGGAGT GACCTGGTCA CGCACCAGCA GCGCAGACGT CGCCCAACTC
ATCAGCTTGT CCGAAGACGC CCAACTCATC AACATGCTCG AAGTCCACGA CACCACCGGC
TACGGCGACT CATCCCTGGA CTCCCCCCGA TCCACCCTCG CCCAAGCAGC GGACTACTGG
ATCAGCCTCA AAGATGTCCT GGTCGGTACC GAAGACCACG TCATCATTAA CCTGGGCAAC
GAACCATTCG GGAACAACGA CACCACCAAT GCACGATACG TCAACGACAC CACCACCGCG
ATCACACGAC TACGCAACGC CGGTCTCACC CACACCATCG TGGTGGACGC CCCCGGCTGG
GGCCAAGACT GGCAACACAT CATGCGCGAC AACGCCGCCA CCATCCTCAA CGCTGACCCA
CTGAAGAACG TGGTGTTCTC CGTCCACATG TACGAGGTCT ACTCCTCCCC GCAAACCGTC
AAGGACTACA TCAACTCCTA CCGGTCCCGC GAGCTCCCCC TCATCATTGG AGAGTTCGCC
TCCACCCACT TTGGTAAACC CGTCGCCTGG GAAACCATCC TGAACGAATC AACAAACAAA
GGAATCGGAT ACTACGGGTG GTCCTGGTCA GGCAACGGCC CCGGTCTTGA AGCACTCGAC
ATCGTCAACA ACTTCAACGG ATCCTCACTA ACCACCTGGG GCAAACAACT GTTCACCTCG
CCCCACGGCA TCGCAAAAAC AGCCACAACT GCGTCCTACT TCACCGGCTC AACCGGTGGA
AACAACGGCG AGTACCCCAC CTGCGCCAGC GCGTCATCAG ACCCCGACGG GGACGGCTGG
GGCTGGGAAA ACAACCAGTC CTGCATTGTG CCCACCCCAA CGACCTACCC CACCTGCGCC
AGCGCATCAT CAGACCCCGA CGGGGACGGC TGGGGCTGGG AAAACAACCA GTCCTGCATC
GTGAAACCGT AG
 
Protein sequence
MRSARAIAAA LALASTAAFT APVSAASAAT PDGIHVKDGR IYEADGTELI LRGVNHAHAW 
YNNETGAYAD IAHAGANSVR TVLSNGVTWS RTSSADVAQL ISLSEDAQLI NMLEVHDTTG
YGDSSLDSPR STLAQAADYW ISLKDVLVGT EDHVIINLGN EPFGNNDTTN ARYVNDTTTA
ITRLRNAGLT HTIVVDAPGW GQDWQHIMRD NAATILNADP LKNVVFSVHM YEVYSSPQTV
KDYINSYRSR ELPLIIGEFA STHFGKPVAW ETILNESTNK GIGYYGWSWS GNGPGLEALD
IVNNFNGSSL TTWGKQLFTS PHGIAKTATT ASYFTGSTGG NNGEYPTCAS ASSDPDGDGW
GWENNQSCIV PTPTTYPTCA SASSDPDGDG WGWENNQSCI VKP