Gene Jden_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2083 
Symbol 
ID8381242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2275074 
End bp2275787 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID645004836 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003162024 
Protein GI256833297 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.873655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCA TCCTTGTTGT CGAAGATGAA GAGTCATACC GTGAGCCGTT GACTTACCAA 
CTGACCCGGG AAGGGTACGA CGTTGTGGCG GTAGCAACAG GAACTGAAGC CCTGAGTGCC
TACGACGATG AACAACCTGA CCTTGTCCTT CTTGACCTGA TGTTGCCGGG TTTGTCCGGA
ACGGAGGTGT GCCGGGAGCT ACGGTCACGC GGTGATGTCC CTGTCATTAT GTTGACGGCA
AAGGACGGCG AGATTGACAA GGTTGTGGGG TTGGAACTTG GTGCAGACGA CTACGTGACA
AAGCCCTACT CGTTCCGTGA ATTACTGGCA CGGATGCGAG CGGTGCTTCG ACGCCACACC
AGTGCAAGCG CATCCGAATC CACTGACTTC CGTGATGACG ACGACGATCA AGTTCTTCAC
GCTGGCCCTG TAGCGATGGA TGTCGAACGG CACGTTGTCA CTGTTCGGGG GGACAGCGTG
GCGTTTCCAT TGAAGGAGTT TGATCTCCTG GAATACCTGC TCCGTAACGC TGGTCGCGTC
CTCACTCGAG GGCAACTCAT TGACCGCGTC TGGGGGAGCG ACTACGTGGG TGACACCAAA
ACCCTCGACG TGCACATTAA ACGGATCAGA GCCAAGATCG AAGAAGACCC GGGTAGCCCG
CAACTCATCC TTACCGTCCG GGGACTTGGC TATAAATTTG CCGATGTGAG CTGA
 
Protein sequence
MTRILVVEDE ESYREPLTYQ LTREGYDVVA VATGTEALSA YDDEQPDLVL LDLMLPGLSG 
TEVCRELRSR GDVPVIMLTA KDGEIDKVVG LELGADDYVT KPYSFRELLA RMRAVLRRHT
SASASESTDF RDDDDDQVLH AGPVAMDVER HVVTVRGDSV AFPLKEFDLL EYLLRNAGRV
LTRGQLIDRV WGSDYVGDTK TLDVHIKRIR AKIEEDPGSP QLILTVRGLG YKFADVS