| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2062 |
|---|
| Symbol | |
|---|
| ID | 8381221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2250356 |
|---|
| End bp | 2252209 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645004815 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003162003 |
|---|
| Protein GI | 256833276 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGAA TCGGCTTGGA ACCAGGCACA CAAATAGGCG GATATACCAT CGTGCATCCG
CTGGGAGCGG GCGCAATGGG TGTGGTGTAC CGCGCCATCG ACGATGGTGG GCACCCCGTC
GCGTTCAAAC TCCTGCGCAC TGACTCTTTA CCAAAAGATG AACTTCGAGC CCGAGTCGAA
CGAGAAGCCG CGTCACTACG CAAAATCAAC CACCCCAGCG TCGCTGCCAT GCTCGACCTC
GAGATTGACG ACGACGAAAT GTTCATCGTC TATGAACTCA TCGAGGGCCC CACCCTCGAC
ACCTGGGTCG CTGACAACGG GCCGTTGTCC TCCCAACAAC TCGCCGACAC CGCCACGGAC
CTCTATGACG CTCTCGCGGC TGTCCATGAG GCAGGCGTCA TCCACCGAGA CATGAAACCC
AACAACATCA TCATGTCTGA TCACGGCCCC GTCCTCATCG ACTTTGGCCT GGCCCACGGG
CTCGAAGACC ACCGCCTCAC CCGCACCGGG TTAGTCATGG GAACCCCCGG CTACCTCGCC
CCAGAACTGG TTAACGGGCA AGCCCCCTCC CAAAGCTCAG ACTTGTGGGG GTGGGGTGCC
GTCCTCGCCT TCGCTGCCAC CGGCAGACTT CCCTTTGGTG AAGGAAGCTT CCAATCAGTG
ATCGCCCGAG CCATGGCAGG GAAAGCAGAC GTCAACGGGC TCGACCAACG CGTTGCCTGG
GCGCTGCGAG GGGCGCTCGC CGTCGATCCA CACCACCGGT GGACACCCCA AGAAGTACTC
GACGAACTGC ACAACGCGGC ACTCAGCCCC ACCGAAGAAA TCTTCCACGA CTCACACCCT
GATGTGGAAG CGACCGAGGT TCTCGACTCT GACCAACTTG CAGCCTTTGC CGCAGGACCG
ACCGGATATA CCGACAAAAT CGGGGTAGGT CACGGACCGG ACACGTGGGA TCCGCGGACA
GCAGGCAGCG GCGGTACCCG CACGGAGGTG ATCGACACAT CGACAAGCAA CGACGGTCAT
ACTCGCGCAT TCACCGTCCC GTCACCTGCT CCAGAACCCC TTGAGGAACC CACGCAAGTC
ATCGCAACGG AGCCCGCATA CCAGCAGGCA CCGCCGTCAT TTGCTCCTGG GTCAACCCCC
GCCACCCCAA TGAGCCCGGA ACCTCCGGGT CCACCCTTGG GTGGATACCC GCAGGTCTAT
GGAACAAACG ATGCGCCTGT TGCGCCGCCG CAACCCCCGG ACCTGTACAC CCGCCCGAGC
CCAGCACCGC GCCCCTTCGT GACAATAGCG GTGAGCCTCG CGTTCATTGC GTGGGGGAGC
GTACGTCCCG GGTGGACGCT CGTGGTGTTG ATTCTCGCGC TTCTTGTGGC CCGCACGGTT
GGGGTCATGT GGGATTCCTT CCAGTTCCGG CGTGAAGTGA AAGGGGTGAC ACGGCGTGAG
CGGGCCGTCC TTGTCGCGAA ATCTCCGCTC CTGGTTGTTC GGGCAGCATT GGGCCTCATC
CCTAATGTTG CGGTCGCAGT CAGTTGCGCT CTGGTTATCG CTGGGGGAGT GTGGTGGGCG
GTGGATTCTC AAACAGTCCA GTTTGGTGAC TGGGATGTTC CACCAGCGTG GGTGTACTCG
GTGATCCTTG TCGGGGCTGG GGCGCTGATT TTGGCGCTGA CCTGGTGGGG GCCAGTATCG
AGGTTGACTC GGGCTGGTCA GCGGGAAATA TTCCGTGGTC TCATTCCACA GCTTTTTGGT
ACCACCGTCT TTGTGCTGAT CGTCATTGTG ATTGCCGGGT ATGCACTGGC GTTACTGGCG
CAAGGCGCCG ACCCTCATTG GGCGCCACTT CCCACCCCGC CATCCTTCCG CTAA
|
|---|
| Protein sequence | MERIGLEPGT QIGGYTIVHP LGAGAMGVVY RAIDDGGHPV AFKLLRTDSL PKDELRARVE
REAASLRKIN HPSVAAMLDL EIDDDEMFIV YELIEGPTLD TWVADNGPLS SQQLADTATD
LYDALAAVHE AGVIHRDMKP NNIIMSDHGP VLIDFGLAHG LEDHRLTRTG LVMGTPGYLA
PELVNGQAPS QSSDLWGWGA VLAFAATGRL PFGEGSFQSV IARAMAGKAD VNGLDQRVAW
ALRGALAVDP HHRWTPQEVL DELHNAALSP TEEIFHDSHP DVEATEVLDS DQLAAFAAGP
TGYTDKIGVG HGPDTWDPRT AGSGGTRTEV IDTSTSNDGH TRAFTVPSPA PEPLEEPTQV
IATEPAYQQA PPSFAPGSTP ATPMSPEPPG PPLGGYPQVY GTNDAPVAPP QPPDLYTRPS
PAPRPFVTIA VSLAFIAWGS VRPGWTLVVL ILALLVARTV GVMWDSFQFR REVKGVTRRE
RAVLVAKSPL LVVRAALGLI PNVAVAVSCA LVIAGGVWWA VDSQTVQFGD WDVPPAWVYS
VILVGAGALI LALTWWGPVS RLTRAGQREI FRGLIPQLFG TTVFVLIVIV IAGYALALLA
QGADPHWAPL PTPPSFR
|
|---|
| |