| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2055 |
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| Symbol | |
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| ID | 8381214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2243028 |
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| End bp | 2244659 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004807 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_003161996 |
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| Protein GI | 256833269 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00350508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGC TCATTGCATT CAATGAGGAA GCCCGGCGCG GTATGGAGCG CGGGCTCAAC
ATCCTCGCCG ACACCGTCAA GGTCACCCTC GGTCCCAAGG GCCGTAACGT TGTGCTCGAC
AAGAAGTGGG GCGCCCCAAC GATCACTAAC GATGGTGTGT CCATCGCTAA GGAGATCGAA
CTCGAAGAGC CTTACGAGAA AATTGGTGCA GAACTCGTCA AAGAGGTCGC CAAGAAGACT
GATGACGTCG CCGGTGACGG AACAACCACC GCGACTGTCC TCGCTCAGGC GCTTGTGCGT
GAAGGGCTGC GCAACGTCGC TGCCGGTTCG AACCCCATTG CTTTGAAGCG TGGAATCGAA
AAGGCTGTTA ACGCAGTCAC TGAGGAACTC CTCACTGCCG CGAAAGACAT CGAAACCAAA
GAAGAGATCG CTGCAACAGC TGCTATCTCT GCTGGTGACC CAGCAATTGG TGAACTGATC
GCTGAAGCCC TCGACAAGGT TGGTAAAGAA GGCGTCATCA CCGTTGAAGA GTCCAACACT
TTTGGTCTCG AACTGGAACT GACCGAAGGT ATGCGGTTTG ACAAGGGATT CCTTGCCCGC
TACTTCGAGA CAGACCCAGA GCGTCAGGAA GCAGTCCTCG AAGACCCATA CATCCTTCTC
GTTGAATCCA AGATCTCCAA CGTTAAGGAC CTGCTGCCAC TTCTTGACCA GATCATGAAG
CAAGGCCGTT CCTTGCTCAT CATCGCTGAA GACGTCGAAG GTGAAGCACT TGCCACCCTC
GTGTTGAACA AGATCCGTGG CACCTTCAAG TCCGTTGCTG TCAAGGCACC TGGCTTCGGT
GACCGCCGCA AGGCGATCTT GCAGGACATC GCGATTCTTA CCGGTGGACA GGTCATCTCC
GAAACTGTGG GCCTCAAGCT CGAAACTGCG ACCTTGGACC TTCTTGGTCA GGCACGCAAG
GTTGTTGTCA CCAAGGACGA GACCACCATC GTTGAAGGTT CAGGCGACCA AGACCAGATC
GCTGGTCGCG TCAAGCAGAT CCGCGCGGAA ATCGACAAGT CTGACTCCGA CTACGACCGT
GAAAAGCTTC AGGAGCGTCT CGCGAAGCTC GCCGGTGGTG TCGCTGTCAT CAAGGCTGGC
GCCGCAACTG AGGTTGAGTT GAAGGAACGT AAGCACCGCA TCGAAGATGC TGTGCGTAAC
GCAAAGGCCG CTGTCGAAGA AGGCATTGTT GCCGGTGGTG GTGTTGCACT GATCCAGGCT
GGTAAAGCCG CATTCGACAA GGACGCACTG TCCTCGCTCG AAGGGGACGA AGCAACCGGT
GCAGCAATTG TGCGCTCCGC AATCGACGCC CCACTGAAGC AGATCGCGAT CAACGCTGGT
CTTGAGGGTG GAGTTGTTGC TGAGAAGGTC CGCAACCTTC CTGCCGGCCA GGGACTTAAC
GCCGCAACTG GCGTATACGA GGACCTGCTC GCTGCTGGTG TCAACGACCC AGTGAAGGTC
ACCCGGTCCG CGCTGCAGAA CGCTGCATCG ATCGCTGCAC TGTTCCTCAC CACTGAGGCA
GTCGTTGCAG ACAAGCCTGA GAAGGCTCCT GCAATGCCAG AAGGTGCTGG CATGGGCGAC
ATGGGCTTCT AA
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| Protein sequence | MAKLIAFNEE ARRGMERGLN ILADTVKVTL GPKGRNVVLD KKWGAPTITN DGVSIAKEIE
LEEPYEKIGA ELVKEVAKKT DDVAGDGTTT ATVLAQALVR EGLRNVAAGS NPIALKRGIE
KAVNAVTEEL LTAAKDIETK EEIAATAAIS AGDPAIGELI AEALDKVGKE GVITVEESNT
FGLELELTEG MRFDKGFLAR YFETDPERQE AVLEDPYILL VESKISNVKD LLPLLDQIMK
QGRSLLIIAE DVEGEALATL VLNKIRGTFK SVAVKAPGFG DRRKAILQDI AILTGGQVIS
ETVGLKLETA TLDLLGQARK VVVTKDETTI VEGSGDQDQI AGRVKQIRAE IDKSDSDYDR
EKLQERLAKL AGGVAVIKAG AATEVELKER KHRIEDAVRN AKAAVEEGIV AGGGVALIQA
GKAAFDKDAL SSLEGDEATG AAIVRSAIDA PLKQIAINAG LEGGVVAEKV RNLPAGQGLN
AATGVYEDLL AAGVNDPVKV TRSALQNAAS IAALFLTTEA VVADKPEKAP AMPEGAGMGD
MGF
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