Gene Jden_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2038 
Symbol 
ID8381197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2225159 
End bp2226046 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content56% 
IMG OID645004790 
Productflagellin domain protein 
Protein accessionYP_003161979 
Protein GI256833252 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.416457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTTT CTATTAACCA GAACATTGCG GCAGTAAACT CCTACCGCAA CCTTGCGAAC 
ACTCAGAACG ACCTTTCCAA GTCGTTGGAG AAGTTGTCCT CTGGGTTCCG GATCAACCGT
GCAGCAGATG ATGCTGCTGG GTTGGCGATC TCTGAAGGTC TTCGTTCACA GGTTGGTGGC
CTGAAGGTCG CTGCCCGTAA CGCGCAAGAC GGTATCTCCA TGGTGCAAAC CGCTGAAGGT
GCGCTCACGG AAACCCACGC GATCTTGCAG CGTCTTCGTG ACCTTGCCGT GCAGGGTGCG
AACGACTCCA ACAACACCGA AGCACGCGCC AACATCACGA CCGAAGCAAA AAGCCTCGTG
TCTGAACTTG GTCGCATCGC CCAGTCCACC AACTTCAACG GCACCACACT GCTTGATGGA
ACAAAGACTG GGGCTACCGC GCTGAACTTC CAGGTTGGTG CAGACGGTAA CACCAACTCC
GCCATCACCG TTGACCTCGC CCGCGCAGAC GTCGCGACAG TGGCAGCCAA ACTCGCCGTT
GGTGCTGCTG GCACGGTAAC AGGTGTAAAC GACGGAACTC TTGCTGGCAT CAGCTTCGAC
AACCACACCG TTGCGCAGGC ATCGATTGAG CGTATTGATG TGCAAATCGG AAACGTGTCG
ACTGCTCGTG CGGAGCTTGG GGCGTACCAG AACCGGTTTG AGCACACGAT TAAGAACATT
AACGTGGCTG TGGAGAACCT GTCTGCTTCT GAGAGCCGTA TTCGTGACAC CGACATGGCT
CAGGAGATGG TGCAGTTCAC TCGTGCGCAG ATCCTGTCTC AGGCTGGTAC TGCGATGCTT
GCTCAAGCAA ACCAGATCCC TCAGGGTGTT CTCTCCCTCC TGCGCTAA
 
Protein sequence
MGLSINQNIA AVNSYRNLAN TQNDLSKSLE KLSSGFRINR AADDAAGLAI SEGLRSQVGG 
LKVAARNAQD GISMVQTAEG ALTETHAILQ RLRDLAVQGA NDSNNTEARA NITTEAKSLV
SELGRIAQST NFNGTTLLDG TKTGATALNF QVGADGNTNS AITVDLARAD VATVAAKLAV
GAAGTVTGVN DGTLAGISFD NHTVAQASIE RIDVQIGNVS TARAELGAYQ NRFEHTIKNI
NVAVENLSAS ESRIRDTDMA QEMVQFTRAQ ILSQAGTAML AQANQIPQGV LSLLR