| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1865 |
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| Symbol | |
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| ID | 8381029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2042856 |
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| End bp | 2044160 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645004619 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_003161811 |
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| Protein GI | 256833084 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0368682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAG GCTCAGAACA TGACGTTGCA CCACCACCAT CGCGCCGCCC CGTGCAACGG
ATTTCGGGAC CCAACCGCAC AACACCTCCC GATGCACGCG CTGTTCCTGT CGTCCCACGC
GAGCATCATG CACCAATAGA TGACCACCTG GGCGCGTCAA CACCTGCAGC TGCTAGCGCT
GTTCCACGTA CGTATGCTCC ACAGTCACAC TCATCACGTC CCCATGCGGG CAGTTCGATG
CCGCGCACAA CCCCTGCGCC GCCAACTGGA CCACGCGTCA GCCAACGCCC CACATCACCG
CACTCAAGGC CGTCTAACCC TTCATCGCTG AGTGAACGTC AAGGACACTC CGCTGGTTCT
GCGCGAACAA CTCGGCGCCG TCCTGTCGCA CGCATCATTG CGGTCCTGGT TCTTGTTGCC
CTTGTTGCCT GGCCTGTTGG TTTGGTCATG TGGGCAAATG GGAAGCTTAA CCGGGTCGAG
GCCCTGTCTG GTGCACCCAA CACTCCTGGG GATACCTACC TGATTGCCGG CTCAGACTCC
CGTGAGGGGA CCGACATAGG GGGTGACGCC CCCGGTGCCC GCACGGACAC TATTATGCTG
CTCCACGCCC CTGAGGACGG TCCAACGGCG CTCATTTCAT TGCCGCGTGA CATCTATGTG
GCAATCCCTG GGCATGATTC CTCAAAAATC AATGCTGCGT ACTCATGGGG CGGGGCACCT
CTCCTTGTCG ACACAGTGGA GGAGCTCACC GGACTCACTG TGGACCATTA CGTTGAGGTG
GGTTTTAGCG GTGTACAGGG CATTGTTGAC GCCGTGGGCG GTGTTGAGTT GTGTTATGAC
CGGGACGTGC AGGACAAAGA GTCCCGTCTC GATTGGACCG CGGGTTGCCA CATGGCTGAC
GGGGACCAAG CCCTGGCGTT TGCACGGATG CGTAAAGCCG ACCCCCTCGG AGATATTGGG
CGTGCTGAGC GCCAACGCCA AGTGGTGTCT GCTGTTGCCA CCTCACTCCA AGACCCAGCC
AAGCTCATCA ACCCGGCAAC TCAAACGAAG CTCATTAATG CCGGAACCGG GGCGGTGGTG
GTTGACGAGC AGTCAGGGGT CACAGACCTT GGGAAACTCG CCTTAGCTTT CCGGAACGCC
AACTCCGATT CAGGGATCAC CGGTACGCCA CCCATTGAGT CCCTGGATTA CCGTCCAGGC
GGCGTAGGGT CAGCGGTCAA GCTCGACGAC GAAGGCACTG TCCGGTTCTT CGCTGACATT
GCCACCGGTT CACTTGCACC TGGCGAATAC AACGGCTTAG ATTAG
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| Protein sequence | MPAGSEHDVA PPPSRRPVQR ISGPNRTTPP DARAVPVVPR EHHAPIDDHL GASTPAAASA
VPRTYAPQSH SSRPHAGSSM PRTTPAPPTG PRVSQRPTSP HSRPSNPSSL SERQGHSAGS
ARTTRRRPVA RIIAVLVLVA LVAWPVGLVM WANGKLNRVE ALSGAPNTPG DTYLIAGSDS
REGTDIGGDA PGARTDTIML LHAPEDGPTA LISLPRDIYV AIPGHDSSKI NAAYSWGGAP
LLVDTVEELT GLTVDHYVEV GFSGVQGIVD AVGGVELCYD RDVQDKESRL DWTAGCHMAD
GDQALAFARM RKADPLGDIG RAERQRQVVS AVATSLQDPA KLINPATQTK LINAGTGAVV
VDEQSGVTDL GKLALAFRNA NSDSGITGTP PIESLDYRPG GVGSAVKLDD EGTVRFFADI
ATGSLAPGEY NGLD
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