Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1864 |
Symbol | |
ID | 8381028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2041528 |
End bp | 2042703 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645004618 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_003161810 |
Protein GI | 256833083 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.383316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.036217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACGT CGAAACCACC CGCACGACCC CCACTCGCGC ATGCCCCCCA ACGGCACCCG CGAGTCGTCC TGCGCACACT CAGCCTCCTC CTTGTCGGGG CTGTGGCCTT TGGCGCCTCT GCAACATACG CAGGGATGCA ACGTGTCAAA GGGCTCGTGA AAACCGAAAG CGTCGAAGAA CTTGTCGCAC CACCAGCAAC TCCCCCGGAA GATTCAGAAG CGGGGAACTC CCTCAACATT CTGGTCATGG GGTCTGACAA ACGTGTCGAT GGCTCTGTTG CAGGCATGCG TTCAGACACG ACAATGGTTG TGCACATCTC GGAGAACCGA GACCGGATTG AAGTCATTTC CATCCCCCGC GATTCGATGG TCTACATTCC CGAGTGCAAA ACAAGTAATG GCACCGTACT TCCGGCGATC AACCGAGCAA TATTCAACTC TGCTTTCGCC CGGGGGTGGG ACAACGGGCT TGACATTGCA TCCGCTGCTG CGTGTTCGAT TAACACTGTT CAACAAAACA CTGGTTTGCG GATTGATCAC TACGTTGTTG TCGATTTTGA GGGGTACACC GGTATGGTGG ACGCCCTTGG TGGTATCGAG ATTGACATCC CTGAAGCAGT GGACGCCCCG AAAGCAGACA ACCTGGTGTT GGAAGCTGGA CCCCAAACCC TCACAGGACA CCAAGCATTA TCACTTGTTC GGGCACGAAA AGGGACAGGT TGGGGCCTTG AAATGGGTTC TGACCTCAAA CGTATTGAAC GACAACAAGC AGTCCTTGAC GCGACTGCTG AGACAGTTTT CAAACAAAAT ATCCTCACCG ACCTGAACAA ACTCACCCAG TTCGCTACGG CAGGCATGTC CTCCTTGACG ATGAACCCAC AGTTGTCAGA CAACATGATT GGTCTCGCCA CGTCCATGTC GTCTCTCAAG ACCGAGAACA TTCACTTTAT TGCTGTTCCT GTTGCAGACG ATCCAGCTGA CCGCAACCGT GTGGTGTGGA CAACGGAAGC AACCCCTATG TGGGAAAAAC TTGCCCGAGA TGAGCCTCTT GTTGAACCGG TAGAGTGTGA CCCTGCCCAA GCGGACACCG CCGAAGGTGA TGCCGCCACA GATGACAGTT CCGACTGTGT CCCCGCAGGT TCGGATACTG ACTCCACAGG AACCACAGAG AACTGA
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Protein sequence | MTTSKPPARP PLAHAPQRHP RVVLRTLSLL LVGAVAFGAS ATYAGMQRVK GLVKTESVEE LVAPPATPPE DSEAGNSLNI LVMGSDKRVD GSVAGMRSDT TMVVHISENR DRIEVISIPR DSMVYIPECK TSNGTVLPAI NRAIFNSAFA RGWDNGLDIA SAAACSINTV QQNTGLRIDH YVVVDFEGYT GMVDALGGIE IDIPEAVDAP KADNLVLEAG PQTLTGHQAL SLVRARKGTG WGLEMGSDLK RIERQQAVLD ATAETVFKQN ILTDLNKLTQ FATAGMSSLT MNPQLSDNMI GLATSMSSLK TENIHFIAVP VADDPADRNR VVWTTEATPM WEKLARDEPL VEPVECDPAQ ADTAEGDAAT DDSSDCVPAG SDTDSTGTTE N
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