Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1856 |
Symbol | |
ID | 8381020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2030511 |
End bp | 2032019 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645004610 |
Product | Phosphomannomutase |
Protein accession | YP_003161802 |
Protein GI | 256833075 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.114337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00605536 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGTGCAC ATAAGCCTGG CGTTGATTTA GCCGAGATCA TTAAGTCGTA TGACGTTCGT GGGGTTGTTC CCCAGCAGTT GAATGCTGAG GTGGCGCAGG CGATTGGTGC GGCGTTTGCC ACTGTGGTGG TGATTCCTGA TGCTGGTGAT CGTGCCGATC AGACTCCGGC GGATATTGTG GCGGCTGGTG GGCGGCGTCC TCAGGTTGTT GTGGGGCGGG ATATGCGCGA GTCGGGGCCG GAGTTGGTGG CGGCGTTTGC GCGTGGGTTG ACTGCTGCTG GTGTGGATGT TCTTGATATT GGTTTGTGTT CGACTGATGG TTTGTATCAC GCGTCGGGTG TGTGGGGTAT TCCGGGGGCG ATGTTTACGG CGTCGCATAA TCCTGCGCAG TACAACGGGA TGAAGTTGTG TCGTGCGGGG GCGCGTCCGG TGGGTCAGGA TTCGGGGTTG GGTCGGATTC GTGAGTTGGC TCAGCAGTAT GTGGCTTATG GGTTGCCTGG GGAAGCAACA CAGTTGGGTC AGGTGTCGCG TCGTGAGATG CTCGGCGAGT ACGCCTCATT TTTGCGGTCT TTGGTTGATA TTTCAGGGAT CCGCCCGTTG AAGGTTGTGG TTGATGCCGG GAACGGCATG GGCGGGTTGA CGGTTCCTGC GGTGTTTGGT GATGCGGCAG GGTTGCCGGC GTTGCCGCTG GATATTGTTC CTTTGTATTT TGAGTTGGAT GGGTCGTTCC CGAACCATGA GGCGAACCCG CTTGATCCGA AGAACTTAGT TGACTTGCAG CGTGCTGTTG TTGAGCATGG TGCGGATATT GGGTTGGCGT TTGATGGGGA CGCTGACCGG TGTTTTGTTG TTGATGAGCA GGGGCGGGCG GTGAGTCCAT CGGCGATTAC GTCGTTGGTG GGGCTGCGTG AGGTCGCTAA GGAACGCGAA GCTGGCCGTG ATCCTGTGGT GATTCACAAC CTGATTACCT CGCGTGCTGT GCCTGACTTT TTGGAAGCTG CGGGGGCGCG GGTTGTGCGC ACTCGGGTGG GGCATTCGTT TATTAAGGCG GAGATGGCCT CGCATGAGGC GATTTTTGGG GGTGAGCATT CTGCTCACTA CTACTTCCGT GATTTCTTCT TTGCAGACAC CGGGATGCTT GCTGCGTTGC ATGTGTTGGC GGCTCTTGGG TCTCAACCGC ACCCGCTGTC AGCGATCGCA GACATGTATG AACCGTATGT CGCCTCAGGG GAGATTAACT CTACTGTTCG TGATGTTCCT GCGGCTCGTG CTCGTATTGT CGATGCGTAT GTGACGAATC AGGGCGGCGG TGAGGTCGTT GTTGATGAGT TGGATGGGTT GACGGTGTCG CATTGGGAGG GCCACCCGCA GTGGTGGTTT AACGTGCGGG CGTCGAACAC GGAACCGTTG TTGCGGCTCA ATGTGGAAGC AGCGGATGAG GACATGATGG TGAAGGTTCG AGATGATGTT CTTGGGCTGA TCCGCGGAAC TGAGGGAGAG CAGGAATAA
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Protein sequence | MSAHKPGVDL AEIIKSYDVR GVVPQQLNAE VAQAIGAAFA TVVVIPDAGD RADQTPADIV AAGGRRPQVV VGRDMRESGP ELVAAFARGL TAAGVDVLDI GLCSTDGLYH ASGVWGIPGA MFTASHNPAQ YNGMKLCRAG ARPVGQDSGL GRIRELAQQY VAYGLPGEAT QLGQVSRREM LGEYASFLRS LVDISGIRPL KVVVDAGNGM GGLTVPAVFG DAAGLPALPL DIVPLYFELD GSFPNHEANP LDPKNLVDLQ RAVVEHGADI GLAFDGDADR CFVVDEQGRA VSPSAITSLV GLREVAKERE AGRDPVVIHN LITSRAVPDF LEAAGARVVR TRVGHSFIKA EMASHEAIFG GEHSAHYYFR DFFFADTGML AALHVLAALG SQPHPLSAIA DMYEPYVASG EINSTVRDVP AARARIVDAY VTNQGGGEVV VDELDGLTVS HWEGHPQWWF NVRASNTEPL LRLNVEAADE DMMVKVRDDV LGLIRGTEGE QE
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