Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1822 |
Symbol | |
ID | 8380986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1989283 |
End bp | 1992003 |
Gene Length | 2721 bp |
Protein Length | 906 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645004576 |
Product | preprotein translocase, SecA subunit |
Protein accession | YP_003161768 |
Protein GI | 256833041 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCACCA TCCTGGAGAA AATCCTTCGC TTCGGCGAAG GGAAAATCCT CAAGAAACTG AACGTCATCG TTCAGCAGGT CAACGCCCTC GAAGAGCACT ACCAGGCGTT CACCGACGAA GAACTCCGCG AGGAGACCGC GCGATTCAAA GAAGACATCG CTGAAGGTAG TTCACTGGAC GCATTGCTCC CGCAGGCATT CGCGGTCGTG CGTGAAGCAT CTGTGCGAAC ATTGGGCCAG CGTCACTACG ATGTGCAAAT CATGGGTGGT GCAGCCCTCC ACATGGGGAA CATCGCCGAA ATGAAGACCG GTGAAGGAAA GACCCTGGTC GCCACCCTCC CTGCCTACCT CAACGCCCTG TCAGGACAAG GCGTTCACAT TGTGACCGTG AACGACTACC TTGCGAAATA CCAGTCCGAC ATCATGGGTC GTGTGTTCCG GTTCCTTGGG CTGAAAACTG GCTGCATCGT TTCTGGCCAA AACCCCACTG AGCGGCGTGC CCAGTACGAA GCTGACATCA CCTACGGGAC AAACAACGAG TTCGGGTTTG ACTACCTGCG TGACAACATG GCGTGGTCCA TGAAAGATCT TGTGCAACGT GGCCATAACT TCGCCATCGT TGACGAGGTT GACTCCATTT TGATCGACGA AGCCCGAACC CCGCTGATCA TCTCCGGTCC CGCCGATGGT GATGTCAACA AGTGGTACAC GGAGTTCGCA AAAGTCTCAC GCCGCCTGAT CGCGGGGGAA GATTACGAAG TCGACGAAAA GAAACGCACC ATCGGGATCC TGGAACCCGG TATTGAAAAG GTCGAAGACT ACCTGGGGAT CGACAACTTG TATGAGTCCC TGAACACGCC ACTGATCGGG TTCCTGAACA ACTCGATCAA AGCTAAAGAG CTCTTCAAAC GTGACAAAGA CTACGTGGTC ATGAACGGTG AAGTCATGAT CGTTGACGAA CACACGGGCC GTATTCTGGC CGGTCGCCGT TACAACGAAG GCATGCACCA GGCGATCGAA GCCAAAGAGG GCGTCACGAT CAAAGCCGAG AACCAGACCC TGGCAACAAT CACGTTGCAG AACTACTTCC GCCTCTATTC CACGCTGTCA GGGATGACCG GTACCGCGGA AACGGAAGCA GCCGAGTTCC ACTCCACCTA CTCACTAGGT GTTGTACCGA TTCCGACGCA CCGTCCGGTG CAACGTGTTG ACCAGTCGGA CCTCATTTAC AAGACAGAAA CTGGCAAGTT CCAGGCGGTT GTTCAAGACA TTGTTGAGCG GCACGCTCAC GGGCAACCCA TTTTGGTGGG AACGACGTCT GTGGAGAAAT CAGAGCTGCT CTCCTCTCTG TTGAAAAAAC AAGGTGTCCC TCACGAGGTG CTCAACGCGA AGCAGCACGC CCGAGAAGCG GCCATTGTTG CGATGGCTGG GCGCAAAGGT GCGGTCACGG TAGCCACCAA TATGGCTGGT CGTGGAACTG ACATCATGCT CGGTGGAAAC GCCGAATTCA TGGCCCATGC CGAACTAGAA CAACGCGGGC TTGACGCAGT AGAACACCCA GACGAATACG AAGCAGCGTG GGATGAAGCA CTTGCTGCTG CTCAACAAGC TGTCAAAGAC GAACACGACG AAGTCGTGGA ACTCGGGGGC TTGTACGTTC TGGGCACCGA ACGCCACGAA TCACGGCGTA TTGACAACCA GTTGCGTGGA CGTTCCGGGC GCCAAGGTGA CCCCGGTGAG TCACGGTTCT ACTTGTCCAT GGAAGACGAA CTGATGCGGT TGTTCGGTTC AGGTCTTGCT GAATCCATGA TGAACCGTGC CGGGTTCCCA GAAGACGTGC CACTGGAATC GAAGATGGTG TCGCGTGGTA TCGCCTCAGC TCAGGGGCAA GTGGAGTCAA GGAACCTGGA GATCCGCAAG AACGTCCTCA AGTACGATGA CGTGCTCTCC CGCCAGCGCA CAGTCATTTA TGACGAACGT CGCCGTGTCC TTGAGGGCGA GGACATGCAG GAACAAATCC AGCACTTCCT CACCGATGTC ATCACTGGGC ATGTTGAGAT GACAACCACG TCCAATGACC AAAACGAATG GGACTTGGAA GCGCTGTGGG CAACCCTGAA AGGGATCTAC CCAATCTCGA TCACCGTGGA GGAAGTGGAA GAGCAAGCAG GTGGCCGCAC CCACCTGAAA CGCGATGAAC TGCTGGAAGA AATCCTCTCT GACGCCCGCT TGGCATATGA GCAACGCGAA GCCGAACTCG GCTCGGAGAA TCTCCGAGAC TTGGAACGCC GAATCGTGTT GTCCGTTGTA GACCGTAAGT GGCGCGAACA TCTCTACGAG ATGGACTACC TCAAGGAAGG CATCGGGTTG CGTGCTATGG CGCAACGTGA CCCCCTTGTG GAGTACCAGC GTGAAGGTTA TGACATGTTC ACCGCAATGC TGGAAGGCGT GAAAGAAGAG GCCGTTGGCT TCTTGTACAA CCTCCAGGTC ACTGTGGAAA AGAAGGAAGT TGACCTCGAC GGTGACGGCA CTCCCGACAT CGAAGAAGAC GTGATGGTGG CGAAAGGGCT TGATCAGCCC AAGCGGCCCA CCCAGCTTCA GTACACGTCG TCGGAAGGGT CAACCTCCGA GTCGGGTTCG GGAACCTCAG GCGGAGCAGC GAACGCTGGT TCGAACCGCG CAGAGCGCCG AGCAGCGCAA AAGCGTTCGC GGAAACGGTG A
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Protein sequence | MVTILEKILR FGEGKILKKL NVIVQQVNAL EEHYQAFTDE ELREETARFK EDIAEGSSLD ALLPQAFAVV REASVRTLGQ RHYDVQIMGG AALHMGNIAE MKTGEGKTLV ATLPAYLNAL SGQGVHIVTV NDYLAKYQSD IMGRVFRFLG LKTGCIVSGQ NPTERRAQYE ADITYGTNNE FGFDYLRDNM AWSMKDLVQR GHNFAIVDEV DSILIDEART PLIISGPADG DVNKWYTEFA KVSRRLIAGE DYEVDEKKRT IGILEPGIEK VEDYLGIDNL YESLNTPLIG FLNNSIKAKE LFKRDKDYVV MNGEVMIVDE HTGRILAGRR YNEGMHQAIE AKEGVTIKAE NQTLATITLQ NYFRLYSTLS GMTGTAETEA AEFHSTYSLG VVPIPTHRPV QRVDQSDLIY KTETGKFQAV VQDIVERHAH GQPILVGTTS VEKSELLSSL LKKQGVPHEV LNAKQHAREA AIVAMAGRKG AVTVATNMAG RGTDIMLGGN AEFMAHAELE QRGLDAVEHP DEYEAAWDEA LAAAQQAVKD EHDEVVELGG LYVLGTERHE SRRIDNQLRG RSGRQGDPGE SRFYLSMEDE LMRLFGSGLA ESMMNRAGFP EDVPLESKMV SRGIASAQGQ VESRNLEIRK NVLKYDDVLS RQRTVIYDER RRVLEGEDMQ EQIQHFLTDV ITGHVEMTTT SNDQNEWDLE ALWATLKGIY PISITVEEVE EQAGGRTHLK RDELLEEILS DARLAYEQRE AELGSENLRD LERRIVLSVV DRKWREHLYE MDYLKEGIGL RAMAQRDPLV EYQREGYDMF TAMLEGVKEE AVGFLYNLQV TVEKKEVDLD GDGTPDIEED VMVAKGLDQP KRPTQLQYTS SEGSTSESGS GTSGGAANAG SNRAERRAAQ KRSRKR
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