| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1810 |
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| Symbol | |
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| ID | 8380974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1979303 |
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| End bp | 1980055 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004564 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003161756 |
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| Protein GI | 256833029 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.816651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTTGTGC TGGCTGTGAC TTGTACAGCG ATCGACACAG ACACGGTGGC ACGTTCTGCG
CGTCAAACGC GCGTGATTGC GTCTTCGGGC TTAGGCTCTG ATGTGATGAC AGCCGACGAT
TCTACGACCC GTGCTCCTGG TCATGAGGAC GCGCACGCTC GCGCGCTGCG TTTTGAGCAG
GACGCGCTGG TCCACCTTGA CCAGTTGTAC GCTGCAGCGT TGCGGATGAC ACGTAATCCG
CAGGATGCTG AGGATCTTGT TCAAGAGACA TTTACAAAAG CTTTTGCGGC GTTTCATCAG
TACCGCCCGG AAACAAATCT TAAGGCGTGG CTCTACCGAA TTTTGACAAA CACGTACATC
AATTCGTACC GGAAGAAGCA ACGTGAGCCG CAACAATCCC AGTCGGAAGA CATCGAGGAT
TGGCAGATTG CTCGTGCCGC TCAGCACACG TCGACAGGAC TGAAGTCAGC GGAGGCAGAA
GCATTGGAGC GTCTTCCTGA CTCGGACATC ACCCGGGCAC TTCAAGAGCT TCCTGAGGAC
CGCCGCATCG CTGTGTATCT TGCTGATGTG GAGGGGTTTC CGTACAAGGA AATCGCTGAG
ATTATGGGCA CCCCGATTGG CACGGTCATG TCTCGGCTTC ACCGTGGGCG CGCCCAGTTG
CGTGATTTGT TGGGCGACTA TGCACGTTCC CAGGGCATCA TTCCGGCAAC GTCACACACC
GCAGATACTG GTGTTGAGGA GACAGCCCCA TGA
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| Protein sequence | MVVLAVTCTA IDTDTVARSA RQTRVIASSG LGSDVMTADD STTRAPGHED AHARALRFEQ
DALVHLDQLY AAALRMTRNP QDAEDLVQET FTKAFAAFHQ YRPETNLKAW LYRILTNTYI
NSYRKKQREP QQSQSEDIED WQIARAAQHT STGLKSAEAE ALERLPDSDI TRALQELPED
RRIAVYLADV EGFPYKEIAE IMGTPIGTVM SRLHRGRAQL RDLLGDYARS QGIIPATSHT
ADTGVEETAP
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