Gene Jden_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1803 
Symbol 
ID8380967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1969896 
End bp1970978 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content57% 
IMG OID645004557 
Producthistidine kinase 
Protein accessionYP_003161749 
Protein GI256833022 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.295005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTCTC GTCAGCCGCC GCGTTTAAAG GCGTCGCTTC CCGATGTGCG CCCTTTGGAT 
CGTGCCCGGT CCCTGAAGGT GAAACTGTCG GTGGTTGTGG TGGTTTCGGT GCTCATTGCC
GCGTCGATTA CATGGTTGGG GTTGCGTAAC GGGTTGGGAC CGACCAAAAC CTTTCCGTTG
GCGATTATTT TTTCGCTGTC GTTTACGTTG TTGATTGCAC GCGGAATGAC TTCTCCGTTA
CGGGAGATGA CAGCAGCGGT GAGCGCCATG GCGGAGGGTG ATTATTCGCA GCGTGTCCGG
GCCACCAGTC ATGACGAGGT AGGGCAATTG GCGTTGGCGT TTAATGCCAT GGTTGAGGAG
ATCGCGTCTT CTGACCAGAT TCGGCGCGAC GTCATTGCCA ACGTGTCGCA TGAATTGCGC
ACCCCTGTTG CGGCATTGCA CGCTCAGTTG GAGAACTTGG TTGATGGGGT TGTTGAGCCG
ACCCCGGCAA CGTTGCATAC GGCGCTCACG CAAACGGAGC GCCTTTCGCG GCTGATTTCT
TATCTTCTTG ATTTGTCTCG TATTGAGGCC GGGGCCGCGG AACTTCGGGT CAAGGAGTTC
GCTGTTGGGG ATTTCCTGGA AGACGCTGTC GGCGCGTTGA CCATGCTTGA GGCGGGCAAG
CAACTGGATT TTGTGGTTGA TGTTGATCCC GGTGATTTAA CAATCACCTC TGACCCTGAA
CGTCTGCGAC AGATTGTCAC GAACCTGGTG CAAAATGCGA TTCGGCATTC GCCTTATGGG
GGCACTGTCA CTGTTGTTGC ACGGGAGGAG GGGGACGAGG TGTTGCTGGA CTTCCTCGAC
GAGGGACCAG GGATCGCCGT CGAGGACCGG GAACGTATTT TCCAGCGCTT TGCTCGTGGT
GGCCCAAACT CTCGGTCGGT GAATCACCCG ACCTCTGGTG GGACTGGAAT TGGGTTGGCA
ATTGTTCGGT GGGCAGTGGA CCTGCATGGC GGTTCGGTTC GGGCACTGGA GGCACCAAAG
GGCGCGAGAA TACACGTCCG GCTACCCAAG AACCATACTT TGGTTGGACA TCAGCCCTCG
TAG
 
Protein sequence
MDSRQPPRLK ASLPDVRPLD RARSLKVKLS VVVVVSVLIA ASITWLGLRN GLGPTKTFPL 
AIIFSLSFTL LIARGMTSPL REMTAAVSAM AEGDYSQRVR ATSHDEVGQL ALAFNAMVEE
IASSDQIRRD VIANVSHELR TPVAALHAQL ENLVDGVVEP TPATLHTALT QTERLSRLIS
YLLDLSRIEA GAAELRVKEF AVGDFLEDAV GALTMLEAGK QLDFVVDVDP GDLTITSDPE
RLRQIVTNLV QNAIRHSPYG GTVTVVAREE GDEVLLDFLD EGPGIAVEDR ERIFQRFARG
GPNSRSVNHP TSGGTGIGLA IVRWAVDLHG GSVRALEAPK GARIHVRLPK NHTLVGHQPS