Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1796 |
Symbol | |
ID | 8380960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1960291 |
End bp | 1961409 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645004550 |
Product | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase |
Protein accession | YP_003161742 |
Protein GI | 256833015 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00841895 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTCG CCGCATGGGC GGTGCGCGCT GTGTTGTCTG TTGTGTATGC ACCGATGCGC ATGCTGCACC GTCGACACAA AGTGACATTT ATTTCTCGGC AAGGAAACTC CCCCTCCACC GATTTCACAG CATTGGTCAA TCAGCTCTCG CACGACGATC CTTCCGTGGA GATCACCGTG TTGACTTATG AATTTCACAC GTCGATGCGC CGCAAGGTTG GTTATCTCGC CCACGTGTTT GTGCAGATGT ACCACATTGC CACGTCACGG GTTGTTGTGT TGGACACGTA CTGCATTCCG GTCTCGGTGC TCCGCCACAG TCCTGGTCTT CATGTCATAC AAATGTGGCA CGCGTTGGGA TCAATCAAGA AGTTTGGGTA TTCCATTGTG GACAGCGGTG AGGGGTCAGA TTCACGGGTT GCATCAGTGA TGCGCATGCA TGCACGGTAC GACGTGGTTG CCTGCAGTTC ACCCGCGTGC GTGCCTGCAT TTGCTGAGGC ATTTGACACG CCTTCTGAAC GAGTTGTTGT GGCTCCTCTC CCCCGTGTTG ATGTGCTCAC TAATCGCGCT CACATGGCAC AGCAGCGCGA GCGTCTCTAC CGCGTTTTTC CAGAACTACG GGAGAAGCCA ACTGTGCTGT TTGCACCGAC CTTCCAAAAG GGCCAGCACT TCGCTGCTGA CGAACTACAC CGGTATTTTG CCAAGCACGG GTACACCCTC ATTGCGAAAC CTCATCCCGT TGCGTTGTCC GGGGCACGGG ATACTACCTC GGTGCGCTAC GCACAGTACA GTGCATTCGA ATTGCTTGCG GTCGCTGATT TCCTTGTGAC TGACTACTCG TCCATCATGC TTGAGGCTGC TGTTGCAGAT GTTCCTGTGA TGATTTTGGC GCCAGATGTT GAGGAGTATT CAGCGAAACG AAGTTTTTAT CTGGATTTCG CTGCCGAGGT TCCCAGTCCA ATTACTCGCA GCTTTGACGA ACTACTCGAG CACATGAAGA CATGGGATGG TGACCGGACA GCGTTGCGTG CCTTCGCGGA TCGGTGGGTG TCATACCCAG AGGTCGGTAC CTGCACTGAG CACCTGGCTA GGATGATCCA GTCACACCTC GTGGACTAA
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Protein sequence | MIVAAWAVRA VLSVVYAPMR MLHRRHKVTF ISRQGNSPST DFTALVNQLS HDDPSVEITV LTYEFHTSMR RKVGYLAHVF VQMYHIATSR VVVLDTYCIP VSVLRHSPGL HVIQMWHALG SIKKFGYSIV DSGEGSDSRV ASVMRMHARY DVVACSSPAC VPAFAEAFDT PSERVVVAPL PRVDVLTNRA HMAQQRERLY RVFPELREKP TVLFAPTFQK GQHFAADELH RYFAKHGYTL IAKPHPVALS GARDTTSVRY AQYSAFELLA VADFLVTDYS SIMLEAAVAD VPVMILAPDV EEYSAKRSFY LDFAAEVPSP ITRSFDELLE HMKTWDGDRT ALRAFADRWV SYPEVGTCTE HLARMIQSHL VD
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