Gene Jden_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1760 
Symbol 
ID8380924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1916228 
End bp1917505 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content65% 
IMG OID645004513 
ProductROK family protein 
Protein accessionYP_003161706 
Protein GI256832979 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.533551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0181472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCCA CCGCCCGCAC CCTCAACACA ACCGGAAGCA CATCGGTTGT CCTGGACGCC 
ATCCGCGCCG CAGGAACAAT CTCGCGGGTC GGAATCGCAC AAGTCACCGG ACTCACTGGC
GCGACCGTAT CCACCGTTGT CCGCAAACTC CTCGACGCCC ACCTCGTCAT CGAAATCGGA
CGCGCCGAAT CCACCGGAGG AAAACCCCGC GTCCTGCTCG AACTCAACCC CACCGCACGA
TACGCCGTCG GCGTCCACCT CGACCACGGC GCCATCACCT ACGCCGTGAC CAACCTCGCC
GGAGCCCCCG TCGCACGCCT CGCCCGCCCC GGCCCCGGCA ACGCCAGCCC TGCCGACGTC
GTCATCCGCA TGGCCGACGA AATCAACATG CTTGTCGAAT CCATCGGAAT CGCCCGCGAC
AAACTCCTCG GGCTCGGCCT CGTCTCCCCC GGTCCCCTCT CCTCACGAGC CGGAATGCAC
CTGACACCAC CCTTCATGCG CTCCTGGGAA GACTTCCCCC TCGACACCCA ACTCGCCGAC
GTCGCCCAAC TACCCGTCCT GCTCGAAAAC GACGCCACCG CCGCCGCCAT CGGCGAATAC
TGGTCCGGAG GAACCCAACG CGAAGAATCC TTCGCTGCCC TCTACCTCGG AACTGGACTA
GGCGCCGGCA TCGTCATCAA CGGAACCGCC TACCGAGGCA CCTCCGGAAA CGCCGGAGAA
ATCGGCCACA CCTGCGCCAA CATCGACGGG CCCGAATGCT GGTGCGGGGC ACGCGGATGC
TTTGAAGCAC TCGCCGGCCC AGCTGCCGTC GTCAATGAGG CCTACAGCGA CCCGCGCATC
GTCACAGCCG CCGCCCTCGA CACCTTAGGC GACCACACCC CCATCACCCA GCGGTTCGCA
GCCATCGCCC GCGCCTCACG AATGGGCGAC ACCCCATCGC GACAACTCTT GGAACGCTCC
GCACGCTACG TGGGAGTCGC CGCCCAATCA GTGGCAAACC TCCTTGATGT TCGTATGCTT
GTCCTCACCG GCTCAAGCTT CGCGGCAGCA AGCCACATTT ACGTTCCCGC GATCCGTGAC
ACGCTCGCCG CATCCTTCTT TGCCCGTGAC AACCACGCCG TGCACGTACA ACTGTCACAG
TCCGCTGAAA CAGCCCCCGC CATTGGTGCT GCGGCACTGG TGTTGCAAGC CCAGTTCGTT
CCAGAACGAT CCACGTCACT CGCCGCAAAG GTGCGATCAT CACCGCATGT CAGCGAGTTG
TCGACGCTGT CGCCTTAA
 
Protein sequence
MAATARTLNT TGSTSVVLDA IRAAGTISRV GIAQVTGLTG ATVSTVVRKL LDAHLVIEIG 
RAESTGGKPR VLLELNPTAR YAVGVHLDHG AITYAVTNLA GAPVARLARP GPGNASPADV
VIRMADEINM LVESIGIARD KLLGLGLVSP GPLSSRAGMH LTPPFMRSWE DFPLDTQLAD
VAQLPVLLEN DATAAAIGEY WSGGTQREES FAALYLGTGL GAGIVINGTA YRGTSGNAGE
IGHTCANIDG PECWCGARGC FEALAGPAAV VNEAYSDPRI VTAAALDTLG DHTPITQRFA
AIARASRMGD TPSRQLLERS ARYVGVAAQS VANLLDVRML VLTGSSFAAA SHIYVPAIRD
TLAASFFARD NHAVHVQLSQ SAETAPAIGA AALVLQAQFV PERSTSLAAK VRSSPHVSEL
STLSP