| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1702 |
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| Symbol | |
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| ID | 8380869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1836569 |
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| End bp | 1838209 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004454 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_003161651 |
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| Protein GI | 256832924 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.434034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0282162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGC TCACCGCCGC ACGCCCCAGA GAACGAAAGT TGGAACCGAC TGTGACTCTC
CACGTCTACG ACACCACTTT GCGCGACGGT GCGCAGCAGG AAGGCATCAG TTTGTCCGTC
ACGGATAAAC TGGCCATTGC TCCTCTCCTA GACGAGCTGG GCGTGGGGTT TATTGAGGGA
GGATGGCCTG GTGCTGTCCC CAAGGACACG GACTTTTTTG CTCGTGCTGC CCGGGAGTTG
ACATTAAAGA ACGCGGTGTT GGCCGCGTTT GGGGCCACCC GTAAGGTGGG AGTGGCCACA
GATAAGGACC CTCAGGTTCG CGCGCTTCTT GACTCCCAAG CACCTGTGGT GACGTTGGTG
GCGAAGTCAG ATATCCGGCA TGTTGAGCGG GCACTGAAAA CTGATGGTGC TGAGAACCTA
GCCATGATCC GGGACACAGT TGCTTTCCTG GTGGGGGAAG GGCGCCGTGT GTTTGTCGAC
GCGGAGCACT TCTTTGACGG GTACCGGTAC GACCCCGACT ATGCCACCAA TGCTGCACTC
GCGGCGTTCG ATGCGGGCGC TGAAGTGGTG TGTCTGTGTG ACACTAACGG TGGGATGCTC
CCCAACTGGG TGAGTGACAT TGTCAGCGAA CTGCGTGAGC GCACAGGGGA GGGCATCCTT
GGGATGCACG CCCACAACGA TTCTGGGTGC GCGGTGGCCA ATACGTTGGC TGCGTTGGAT
GCGGGAGCCC AGCATTTCCA AGGCACCGTC AACGGGTATG GGGAACGAAC CGGCAACGTT
GACCTCATCA CGACAGTGGC GAACTTGGAG ATCAAGTATG ACCGTCGCGT TCTTCGTGGT
GGACGTCTTG ATGATGCGAC GCGTATCGCG CACGCCATCT CTGAGATCAC GAACATTTCT
CCATTCGCCC GTCAACCCTA CGTGGGGGCT TCGGCGTTTG CACACAAGGC AGGGTTACAT
GCGTCAGCGA TCAAGGTCGA CGCTGACCTG TACCAGCACA CAGACCCCAC CAAAGTGGGC
AATGACATGC GCATGCTTGT CTCTGACATG GCGGGCCGCG CATCGATTGA ACTCAAAGGA
AAAGAGCTGG GGTTTGACCT GGCGGGTCAA ACCGAGGTGC TTACTCGTAT CACGAACCGT
GTGAAGTCAG CGGAACAGCA GGGGTACACC TATGAAGCTG CGGACGCATC GTTTGATCTT
GTGTTGCGGG ATGAGGTATC TGGTGGGCTC CCGGAGTATT TCACGGTCGA GTCATGGCGG
ACCATTGTGG AAAACTATGG GTCCACCGGT GACGAAGCGA TCGCGGAAGC AACGGTCAAA
CTCCATGCCG GTGGGGAACG CATCATTGTC ACCGCGGAAG GAAACGGCCC GGTGAACGCC
CTTGACCAGG CGTTGCGCCA TGCGGTTGAG AAGATTTACC CGGAGATTGC CAAGTTTGAA
CTCATTGACT TCAAGGTGCG GATTCTGGAT CAAGAACAGG GAACTGATGC GATCACCCGA
GTTCTGATCG AAACAACAGA TGGTGTGAGT TCGTGGTTCA CTGTCGGGAT CGGTCCGAAC
ATCTTAGAAG CTTCGTGGGA AGCGCTCATT GATTCTGCCG TGTACGGGCT TATCCACGCG
GGGGTCAAAC CGGTTGCATA A
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| Protein sequence | MDLLTAARPR ERKLEPTVTL HVYDTTLRDG AQQEGISLSV TDKLAIAPLL DELGVGFIEG
GWPGAVPKDT DFFARAAREL TLKNAVLAAF GATRKVGVAT DKDPQVRALL DSQAPVVTLV
AKSDIRHVER ALKTDGAENL AMIRDTVAFL VGEGRRVFVD AEHFFDGYRY DPDYATNAAL
AAFDAGAEVV CLCDTNGGML PNWVSDIVSE LRERTGEGIL GMHAHNDSGC AVANTLAALD
AGAQHFQGTV NGYGERTGNV DLITTVANLE IKYDRRVLRG GRLDDATRIA HAISEITNIS
PFARQPYVGA SAFAHKAGLH ASAIKVDADL YQHTDPTKVG NDMRMLVSDM AGRASIELKG
KELGFDLAGQ TEVLTRITNR VKSAEQQGYT YEAADASFDL VLRDEVSGGL PEYFTVESWR
TIVENYGSTG DEAIAEATVK LHAGGERIIV TAEGNGPVNA LDQALRHAVE KIYPEIAKFE
LIDFKVRILD QEQGTDAITR VLIETTDGVS SWFTVGIGPN ILEASWEALI DSAVYGLIHA
GVKPVA
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