| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1694 |
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| Symbol | |
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| ID | 8380861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1828009 |
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| End bp | 1829490 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004446 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_003161643 |
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| Protein GI | 256832916 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.660605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00111847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTGACC ACTCGTCACC GCTTGTCCTC GCCTGGGATG TGACCGACAA CCTCATCCAA
CCGACCAGTG ACTTCCTTCA CGGGTGGATC CTTGCGGCAC TGCTGCTCGG GGTCGGGGTG
TTCTTCACCA TCCGCACCCG GTGTGTGCAA TTGCGGTTGT TCCCGCGCAT GTGGGCAACT
GTACTTGGAC GTGACGATGA CACTCAGCAC CCCGGTATTT CCTCATTCCA AGCATTCGCC
ACCGGTATGG CCTCGCGGGT AGGAACCGGG AACATTGTGG GTGTTGCCAT TGCGCTGACA
CTGGGTGGAC CAGGTGCCAT CTTTTGGATG TGGGTTGTTG CGTTTGTGGG GATGGCCACC
GGTTTTGTGG AGGCGACCCT CGCCCAAATT TTCAAGGAAC GCTACAACGG TGATGCCACG
TTCCGTGGTG GACCGGCGTA CTACATTCGC GCCGGGCTGG GGTCGCGGCG GTTTGCCGCG
ATGTTTGCGA TCATCGTGAT TTTTGTGTTC GGGTTTGCTT TCAACATGGT TCAAGCAAAC
ACGATTGCTG ACGCCTTGGA ACAAGGGCAC TCGATTCCAC CGTGGGTGAC CGCGATTGCG
CTGGTGCTGC TGTTAGCTCC GTTGCTGTTG CGTGGGATCA GCGCCATTGC CCGGTTCGCC
GGAACCTGGA TGCCCATTGT TGCCGGTGTG TACATTCTTG TGGCGCTCGC GGTCGCGTTG
TTGAACCTCC CGGCAGTTCC TGGTGTTTTT GCTGACATTG TGACCTCTGC GTTTGGTCTC
AATGAGGCGG TTGCTGGGAC AGGTGCTGGT ATTTTTGCGG CATTGATGAA CGGGACTCGG
CGTGGGTTGT TCTCGAACGA GGCGGGGATG GGGTCGGCCC CGAACATGGC GGCCACGGCT
AGTGTGACGC ACCCGGTGCA GCAGGGGCTG ATTCAGTCGT TGGGGGTTTT CATTGACACG
ATCGTGATTT GTACGGGTAC GGCGATCATG ATTTTGGTGT CTGGGGCGTG GGATGTGTCG
CTTATTGGTT CACAGCAGGG TGCTGCTTTG ACCACTGCTG CGGTGACCAC AGAGTTTGGT
AGCTGGGCGA CGATCCTCAT GACGGTGATT GTGTTCCTCT TTGCGTTCAC CTCCATTTTT
GGGAACTATT CGTATGCGGA GGTGAACCTG CACTATCTCA ATGTGTCAGA GCGCGGCACT
CGCCGCCTTC GTGTGGTGAT CCTTGCGGCT GTGGCGTTGG GTGCGTTGCT GACACTGCCA
GCAGCGTGGG GGTTAGCAGA TATCGCTATG TGGATGATGG CGATGACGAA CCTTGTTGCG
ATTGTGTTGC TGTCCCGCTG GTTCTTTGGG GCGCTCAAAG ACTACGAAGC GATGACGGCA
GGTGGTCAGC GAGTCTCACG TTTTGTCGGG CACAACAATC CTCACCTACC CGGTGATATT
CCTGGCGATG TGTGGGGTGT CAAAGATCCT GACCGCCACT AG
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| Protein sequence | MTDHSSPLVL AWDVTDNLIQ PTSDFLHGWI LAALLLGVGV FFTIRTRCVQ LRLFPRMWAT
VLGRDDDTQH PGISSFQAFA TGMASRVGTG NIVGVAIALT LGGPGAIFWM WVVAFVGMAT
GFVEATLAQI FKERYNGDAT FRGGPAYYIR AGLGSRRFAA MFAIIVIFVF GFAFNMVQAN
TIADALEQGH SIPPWVTAIA LVLLLAPLLL RGISAIARFA GTWMPIVAGV YILVALAVAL
LNLPAVPGVF ADIVTSAFGL NEAVAGTGAG IFAALMNGTR RGLFSNEAGM GSAPNMAATA
SVTHPVQQGL IQSLGVFIDT IVICTGTAIM ILVSGAWDVS LIGSQQGAAL TTAAVTTEFG
SWATILMTVI VFLFAFTSIF GNYSYAEVNL HYLNVSERGT RRLRVVILAA VALGALLTLP
AAWGLADIAM WMMAMTNLVA IVLLSRWFFG ALKDYEAMTA GGQRVSRFVG HNNPHLPGDI
PGDVWGVKDP DRH
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