| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1674 |
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| Symbol | |
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| ID | 8380842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1804732 |
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| End bp | 1806984 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645004424 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003161624 |
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| Protein GI | 256832897 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000586532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0155467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACC CGGCCCCCCT CACCGACGAC GCCCTCGCCA ACCAACCATT CCTCAGCCGG
CCCCTCACCA AACTCCTCGG AACAAAAACC GCGACCGCCC TCACCAAACT TGGGCTCACC
ACCGCCCAAG ACCTCCTCTG GCACACACCA CGGCGCTACG CCGAACCTGG ACGCCTCACC
AACATCGGCG CACTCACCGA AGGTGAACAC GTCACCGTCA TGGCGCGCAT CCACTCCACC
AGCACCCGCA CCATGCGATC CCGATCCGGC GCACTACTCA CCGCCCTCGT CACCGACGAC
ACCCACACAC TCACACTCGC GTTCTTCGCC CGCAGCGCAG GAGCCCTACG CGTCCACGAA
AGTAAACTCC AACCCGGTCG AGTCGCCCTC TTCACCGGAA CAGTGCGCGA CTACCGAGGC
GAACGCCAAC TCACCCACCC CGACTACATC ATCATCGGAA TCGACGCCAC CACCACCGAC
GACGCCATCG ACGTAGCCAA CCGCCCCATC CCCATCTACC CCGCCACCGC AGGCGTCCCC
ACCTGGCGCA TCGAACGCGC CGTCGCCACC GTCCTTGGTC AACTCACCCC CACCGACGTC
CCCGACCCAC TCCCAGCCAC CATCCGCGAA CGCGACCAAC TCCCCACCGC CTACGAAGCG
CTGCGGATGA TCCACCAACC CCACACCGAC AGCGACTGGC GCCGCGCCCG TCACCGCATG
CGCATCGACG AAGCCTTCGT CATCCAAACC GCGCTCATCC AACGACGCCA CACAACCCGC
ACCCTCCCCG CCACCGCCCG CCCCCACATC GCCGGTCAAC TCGCCGACAC CTTCGACGCG
ACCCTGCCCT ACACCCTCAC CCAAGGACAA CGCGACGTCG GCGCAGACAT CGCCACAGAC
CTCGCCTCCA CCCACCCCAT GCAACGCCTC CTCCAAGGAG ACGTCGGATC AGGAAAAACA
CTCGTCGCAC TCAGAGCAAT GCTCCAAGTC ATCGACAACC ACGGACAAGC AGTACTCCTT
GCCCCCACTG AAGTCCTCGC AACCCAACAC GCCGCGACCC TCACCCAACT CCTTGGCCCC
CTCGCCAACG GGCCCCTCAC AAAGGGCCCC GCCACCACCA TCACCCTCCT CACCGGTTCC
CTGACCACCA CACAACGCAA ACGTGCGCTC CTCGACATCG CCAGCGGCAT GGCCGGAATC
ATCATCGGCA CCCACGCAGT ACTCTCCGAC AACGTCCACT ACGCCGACCT CGGACTCGTC
ATCGTCGACG AACAACACCG ATTCGGCGTC CACCAACGCG ACACCCTCCG CACCCGCGGA
ACCCACACCC CCCACATGCT CGTCATGACC GCCACCCCCA TCCCACGCAC CGTCGCCATG
ACAGTCTTCG GCGACCTCGA CATCTCCACC CTCACCGACA TGCCCGCAGG CAGAGCCGGC
ATCACCACCC ACCGCGTCCC CGCAAAAAAC CCCACCTGGA TGAGCAGAGT CTGGCAACGC
GCCGCCGAAG AAATCCACCA AGGCCGCCAG GTCTACGTCG TCTGCCCCCG CATCAACGAC
ACCGAACCAG ACCCCACCAC CGAACCCGAC CTCACCGACC CTGACACACT GCCCCTCGAC
AACACACCCA CCCCACGCAC CCTCGCCTCC GTCACCACCA CCGCCACCAT GCTCGCCAAC
GAACCCGCGC TCGCAGGGGT GCGCATCGGT GTCTTGCATG GCGGGATGTC CGGCGACGAC
AAAGACGCAG CCATGGTCAA CTTCGCCGAC CACACCACCC CGCTCCTGGT TGCCACAACG
GTCATCGAGG TGGGGGTCAA CGTCCCCACC GCATCGACCA TGATCATCCT GGATGCGGAC
AGGTTCGGGA TTTCCCAACT CCACCAGCTC CGTGGCCGGG TTGGCCGAGG AACCGAACCT
GGACTGTGTC TCCTCGTGGC CGACACCCAA CCAGGAACCC CCGCTGATGA CCGACTCAAC
GCGGTCGCCA GCACCACCGA CGGGTTCGAC CTCGCCGCGC GAGACTTGGA ACTTCGGCGT
GAAGGGGACG TGTTAGGGGC AACCCAATCG GGGCGGGGAA GTTCCCTGAA GTTCTTGCGC
GTCATCACCG ATGCAGACCT GATCGCCACC GCCCGCGAAG ATGCCATCAC CATCGTGACT
GCAGACCCCA CACTCACAGA CCACCCGGAA CTGGCTGCTG CAGTCAGGGC CTATAGTGAC
GCTGGTCGCG ACGAGTACCT TGACCGCGCT TAA
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| Protein sequence | MSHPAPLTDD ALANQPFLSR PLTKLLGTKT ATALTKLGLT TAQDLLWHTP RRYAEPGRLT
NIGALTEGEH VTVMARIHST STRTMRSRSG ALLTALVTDD THTLTLAFFA RSAGALRVHE
SKLQPGRVAL FTGTVRDYRG ERQLTHPDYI IIGIDATTTD DAIDVANRPI PIYPATAGVP
TWRIERAVAT VLGQLTPTDV PDPLPATIRE RDQLPTAYEA LRMIHQPHTD SDWRRARHRM
RIDEAFVIQT ALIQRRHTTR TLPATARPHI AGQLADTFDA TLPYTLTQGQ RDVGADIATD
LASTHPMQRL LQGDVGSGKT LVALRAMLQV IDNHGQAVLL APTEVLATQH AATLTQLLGP
LANGPLTKGP ATTITLLTGS LTTTQRKRAL LDIASGMAGI IIGTHAVLSD NVHYADLGLV
IVDEQHRFGV HQRDTLRTRG THTPHMLVMT ATPIPRTVAM TVFGDLDIST LTDMPAGRAG
ITTHRVPAKN PTWMSRVWQR AAEEIHQGRQ VYVVCPRIND TEPDPTTEPD LTDPDTLPLD
NTPTPRTLAS VTTTATMLAN EPALAGVRIG VLHGGMSGDD KDAAMVNFAD HTTPLLVATT
VIEVGVNVPT ASTMIILDAD RFGISQLHQL RGRVGRGTEP GLCLLVADTQ PGTPADDRLN
AVASTTDGFD LAARDLELRR EGDVLGATQS GRGSSLKFLR VITDADLIAT AREDAITIVT
ADPTLTDHPE LAAAVRAYSD AGRDEYLDRA
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