| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1611 |
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| Symbol | |
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| ID | 8380780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1734933 |
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| End bp | 1736204 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004361 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_003161562 |
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| Protein GI | 256832835 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.290813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCA ACGAGATCGT CCTCAAAGCC CAAGGGCTGT ACAAGGTCTT TGGACACCGA
CCTGAAACAG CCGTCACTAA ACTTTCCCAA GGAACAAGCC GAACCGACCT CGGTCCAGGA
ACAACCGCCG CAGTGATCGA CGCATCGTTT GACGTCCAGC GTGGCGAAAT CTTCGTGGTC
ATGGGCCTAT CAGGGTCGGG GAAATCCACC CTTATCCGGA TGCTCAACGG ACTGTGGGAG
CCAACGGCAG GCAACGTCAC AATCCTTGGC GACTCCATCA CCGGTGTCCC CGCCCGCACG
TTGCGTGCTG TCCGGGAAAA GCGCATCTCC ATGGTGTTCC AACAGTTCGC GCTCCTGCCA
CACCGTACTG TGATCGACAA CGTCGCCTAC GGACTAGAAA TTCGCAAAAT GCCTCGTGCG
CAGCGTCTCG CTAAAGCGCG TGAATACGTG AACATGGTGG GCCTTGACGG CTGGGAAGAC
AAATACCCCC AAGAGCTTTC CGGGGGTATG CAGCAACGCG TTGGGTTGGC TCGTGCTCTT
GCTGCTGACA CCGATGTGCT CCTCATGGAC GAAGCGTTCT CCGCCCTGGA TCCACTGATC
CGCCGCGAGA TGCAAGAACA GCTGGTGGAA TTGCAGTCCA AGCTGGGAAA AACCATCATC
TTCATCACCC ACGACCTCAA CGAAGCGATG TTCCTTGGTG ACCGCATCGC AGTCATGCGT
GATGGTCGAA TCGTGCAAAT TGGGACTCCC GAAGAAATCT TGACTGACCC AGCCAACGAC
TACGTGTCTC AATTTGTTCA GGACGTCGAT CGTGCCCGGG TTCTCACTGC TTCGTCGGTA
GCGCAACCCC CAGCTGCGCT CATGCAACTG CCCGGTGGGC CTCGTAAGGC GCTGCGCATC
ATGCGTGAGC AGCAAACGTC AGCCTGTTTT GTTGTTGACC GCGCCCGCAA GCTGCACGGA
GTGATGACGG ACCGCGTCGC GTTAGAACTT GTGCGCAAAG GCGTCGATGA CGTCTCCGGG
CATTTGGCGC AGGCGTCACA CACAGCACCT GATGCGCTAC TTGCTGACTT GGTGACTCCT
TCAGTGGAGT CTGTTTTGCC GCTAGCGGTT GTTGATGAGT CAACACGACT GGTGGGCGTG
ATCCCGCGTG TTGTCTTGCT GGCAGCTCTC GGTGGCGAAC ATGAGGCAGG GGTGAACGCT
GAGCCTGTGC CTCCAGCGTT GGCGCCCTCT GTTGTTGAAG AAGCGTTGAG TGCTGAGGAG
GCGGACAAAT GA
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| Protein sequence | MSTNEIVLKA QGLYKVFGHR PETAVTKLSQ GTSRTDLGPG TTAAVIDASF DVQRGEIFVV
MGLSGSGKST LIRMLNGLWE PTAGNVTILG DSITGVPART LRAVREKRIS MVFQQFALLP
HRTVIDNVAY GLEIRKMPRA QRLAKAREYV NMVGLDGWED KYPQELSGGM QQRVGLARAL
AADTDVLLMD EAFSALDPLI RREMQEQLVE LQSKLGKTII FITHDLNEAM FLGDRIAVMR
DGRIVQIGTP EEILTDPAND YVSQFVQDVD RARVLTASSV AQPPAALMQL PGGPRKALRI
MREQQTSACF VVDRARKLHG VMTDRVALEL VRKGVDDVSG HLAQASHTAP DALLADLVTP
SVESVLPLAV VDESTRLVGV IPRVVLLAAL GGEHEAGVNA EPVPPALAPS VVEEALSAEE
ADK
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