Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1589 |
Symbol | |
ID | 8380758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1712156 |
End bp | 1714588 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645004339 |
Product | putative phosphoketolase |
Protein accession | YP_003161540 |
Protein GI | 256832813 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAC TCACCGACGA GACCCTCACA ATCATTGACC GGTGGTGGCG CGCAGCCAAC TACCTCTCAG TCGGGCAAAT CTACCTGCTC GACAACCCGC TGCTCCGCAC GCCACTGAGC CGCGACGATG TGAAACCCCG TCTCCTCGGC CACTGGGGAA CAACCCCAGG CCTCACGTTC CTCTACGCTC ACCTCAACCG GGTGATCAAG GAACGTCAAC AATCCACCCT GTACATCACG GGACCCGGCC ACGGAGGCCC AGGACTCGTT GCAGGTGCCT ACCTTGACGG GACGTACTCC GAGATCTACT CGGACATCAC CGAAGACACC GAAGGGCTAC AAAAACTGTT CAAACAGTTC TCCTTCCCCG GTGGTATCCC CTCCCACGTC GCACCAGAAA CACCCGGGTC TATCCACGAA GGTGGTGAAC TCGGATACGC GCTCTCACAC GCCTACGGAG CCGCATTCGA CAACCCTGAC CTCCTTATTG CAGCAGTTGT CGGTGACGGT GAAGCCGAAA CCGGGCCCCT AGCGACCAGC TGGCACTCCA ACAAGTTCAT CAACCCAGCC ACCGACGGGA CAGTGCTGCC CATCTTGCAC CTCAACGGGT ACAAGATCGC CAACCCCACC GTCCTTGACC GCATCTCACG CGACGAACTC GAAGCGCTCA TGGTCGGGTA CGGGCACAAA CCCCACTTCT TCGAAGCAGG ATACGACGAC GAAGACGCAT CATCATTCCA CCGCCGGTTT GCTGAGCTTC TCGACACCGT ATTGGATGAG ATTGCGGCCA TTAAAGAACG CGCAGCACAG GGCGACGAAT CACGGCCACA ATGGCCCATG ATCGTGTTCC GCACCCCCAA AGGATGGACC GGCCCAGCCA CCATTGATGG GAAGAAGACA ACTGGTTCGT GGCGAGCACA CCAAGTTCCT TTGGCTAGTG CACGCGACAC CGACGAACAC CTCCAGGACC TCAACGCCTG GTTGCAAAGC TACCGGCCCG ACGAACTCTT TGACGAGAAC GGAAAAGTTG CTCAAGACAT TGCCAGCCTG ACGCCCAAGG GTGACCTGCG CATGAGCGCA AACCCCCACG CCAACGGTGG GGTACTCATG AAGGAGCTGC GCCTTCCCCC CATTGAAGAC TTCGCTGTGG ACGTCCCCAC ACCAGGGTCA ACCATCTCAG AAGCACCCCG TGTGCTGGGG TCCTACCTCA CCGAAGTGAT CCGTAGAAAC CCAGATAACT TCCGGATCTT TGGCCCCGAT GAGACCGCGT CCAACCGGCT CCAAGGCGTT TACGATGTCA CCGACAAACA ATGGAACGCT GAGTTCTTTG ACGGTGACAC CGACGAACAC ATGGCCCGCA AAGGACGCGT TGTCGAGATG CTGTCCGAAC ACCAGTGCCA AGGATGGTTG GAAGGCTACC TCCTCACCGG CCGTCACGGG CTGATGACCT CCTACGAAGC GTTCATTCAC ATCGTGGATT CCATGTTCAA CCAGCACGCC AAATGGTTGA AGGTCACCAA CCACATTCCG TGGCGCCAAC CCATCCCGTC ACTGAACTAC TTGTTGTCCT CACACGTGTG GCGCCAAGAC CACAACGGGT TCTCCCACCA AGACCCCGGG TTCATTGACC ACGTGGTGAA CAAAAAGGCT GAGGTCGTGC GGGTGTACCT TCCCGCTGAC GCCAACACTT TGCTCTCCAC ATACGAGCAC TGCCTCAAGT CGCGTCAGTA CGTCAACGTT GTGGTAGCTG GAAAACAACC AGCACCAAAC TTCCTCTCCA TGGACGAAGC CAAAGCACAC TGCGAACGCG GGTTAGGCAT TTGGGAATGG GCCGGCACCG AAACACCGGG GCAAGACCCT GATGTCGTGC TTGCCGCAGC TGGTGACGTG CCCACCCTTG AGGTCCTTGC AGCAGCAGAC ATTTTGCGCC GCGAACTGCC CGACCTGAAG GTCCGTGTGG TCAACGTCGT TGACCTCATG CGGTTGCAGG ACGAAAACGA GCACCCACAC GGGTTGACTG ACCGTGACTT TGACACGATC TTCACCCGCA ACAAGCCAGT GATTTTTGCA TACCACGGAT ACCCATGGCT TATTCACCGC CTTACCTACC GGCGTAACGG CCACGAGAAC ATTCACGTGC GCGGCTACAA GGAAGAAGGC ACCACGACCA CACCATTCGA CATGGTCATG CTCAACGACT TGGACCGGTT CCACCTGGTC ATCGATGTCA TTGACCGGGT CAAAGGATTG GGTCAGAAGT ACGCTGGGCT TCGTCAAAAG ATGGAAGACG AACGGATTCG TGCCCGTGCA TACACCCGCG AACACGGACA AGACCTCCCC GAAGTTCGCA ACTGGGTGTG GCCTGATGCC GCCAACCAAG CTGATGGTGA AAAAGTCGAT GCGACCCTCG ACACCGGTGG CGACAACGAG TAA
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Protein sequence | MSELTDETLT IIDRWWRAAN YLSVGQIYLL DNPLLRTPLS RDDVKPRLLG HWGTTPGLTF LYAHLNRVIK ERQQSTLYIT GPGHGGPGLV AGAYLDGTYS EIYSDITEDT EGLQKLFKQF SFPGGIPSHV APETPGSIHE GGELGYALSH AYGAAFDNPD LLIAAVVGDG EAETGPLATS WHSNKFINPA TDGTVLPILH LNGYKIANPT VLDRISRDEL EALMVGYGHK PHFFEAGYDD EDASSFHRRF AELLDTVLDE IAAIKERAAQ GDESRPQWPM IVFRTPKGWT GPATIDGKKT TGSWRAHQVP LASARDTDEH LQDLNAWLQS YRPDELFDEN GKVAQDIASL TPKGDLRMSA NPHANGGVLM KELRLPPIED FAVDVPTPGS TISEAPRVLG SYLTEVIRRN PDNFRIFGPD ETASNRLQGV YDVTDKQWNA EFFDGDTDEH MARKGRVVEM LSEHQCQGWL EGYLLTGRHG LMTSYEAFIH IVDSMFNQHA KWLKVTNHIP WRQPIPSLNY LLSSHVWRQD HNGFSHQDPG FIDHVVNKKA EVVRVYLPAD ANTLLSTYEH CLKSRQYVNV VVAGKQPAPN FLSMDEAKAH CERGLGIWEW AGTETPGQDP DVVLAAAGDV PTLEVLAAAD ILRRELPDLK VRVVNVVDLM RLQDENEHPH GLTDRDFDTI FTRNKPVIFA YHGYPWLIHR LTYRRNGHEN IHVRGYKEEG TTTTPFDMVM LNDLDRFHLV IDVIDRVKGL GQKYAGLRQK MEDERIRARA YTREHGQDLP EVRNWVWPDA ANQADGEKVD ATLDTGGDNE
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