| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1515 |
|---|
| Symbol | |
|---|
| ID | 8380684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1627802 |
|---|
| End bp | 1628743 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645004262 |
|---|
| Product | (Acyl-carrier-protein) S-malonyltransferase |
|---|
| Protein accession | YP_003161466 |
|---|
| Protein GI | 256832739 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.347068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0308304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGCAG TTGTATGCCC GGGGCAGGGC TCCCAGACTC CCGCCATGCT TGAGCCATGG
CTGACATTGC CATCCGTGCG TGAGTTCCTC GGCGAACTCA GCGAGGCGAG CGGTGTCGAC
CTTATCGCGC ACGGAACCAC CTCGGATGCG GACACGATTC GCGACACTGC CGTTGCCCAA
CCACTGATTG TGGCCAGTTC GTTGATGGCG TGGCACGCCC TCACGCACGG TAAGACCACG
GCCACACCCC ACGTTGTGGC CGGTCACTCC GTTGGTGAGT TTGCTGCAAG TGCACTTGCT
GGCGTGATGA CGAACGCGCA AGCAACAGCG CTCGTGACCC ACCGTGCGCG CGCGATGGCG
CAGGCAGCTA GCGCCCACGC GACCGGTATG ACCGCTGTTG TGGGTGGTCA ACCAGATGAT
GTGCTTGCCA GTATCGCCGC CGCTGGTTTG ACCCCCGCGA ACATGAACTC CCCACAGCAA
GTTGTTGCGG CGGGTTCGCT CGATGGCATC GCCGCCCTTC AGGCGTCACC CCCCGCTCGG
GCACGGGTCA TCGCGTTGCA GGTCGCTGGT GCCTTTCACA CCGAGTTCAT GGCTCCCGCA
CAAGACGCGT TCCGTGACGT TGCACGCGGC TGGCCGGTTG CTGACCCAAC ACTGACTTTG
CTCAGCAACC GTGATGGCCG CGCTTTCACC GACGGCGCCC ACGGGTACGG TCGCGGACAG
GACATGCTCG ATTCCCTTGT CCACCAAATC ACCTCACCGG TTCGCTGGGA TTTGTGCCAG
CACACTCTCG CAGACCTTGG GGTCACCGGT GTCCTTGAAC TCGCACCAGG CGGGGTATTA
ACTGGGCTCG CGAAACGTAC TCTGAAGGGT GTGGCAACCT GTGCTATCTC TTCACCCGAC
GACCTTCCTA CCGCTCACGA CTTCATCACC GAACACGCCT GA
|
|---|
| Protein sequence | MLAVVCPGQG SQTPAMLEPW LTLPSVREFL GELSEASGVD LIAHGTTSDA DTIRDTAVAQ
PLIVASSLMA WHALTHGKTT ATPHVVAGHS VGEFAASALA GVMTNAQATA LVTHRARAMA
QAASAHATGM TAVVGGQPDD VLASIAAAGL TPANMNSPQQ VVAAGSLDGI AALQASPPAR
ARVIALQVAG AFHTEFMAPA QDAFRDVARG WPVADPTLTL LSNRDGRAFT DGAHGYGRGQ
DMLDSLVHQI TSPVRWDLCQ HTLADLGVTG VLELAPGGVL TGLAKRTLKG VATCAISSPD
DLPTAHDFIT EHA
|
|---|
| |