| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1432 |
|---|
| Symbol | |
|---|
| ID | 8380605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1540688 |
|---|
| End bp | 1542778 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645004182 |
|---|
| Product | serine/threonine protein kinase with PASTA sensor(s) |
|---|
| Protein accession | YP_003161387 |
|---|
| Protein GI | 256832660 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.610669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.496135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTTCCC AAGGACTCGA CCACATCGTC GGACAACTCA TCGACAATCG TTACCGGGTC
ATCGCACGGA TTGCCCGAGG TGGCATGGCC ACCGTCTACC GCGCAACCGA CACGCGCCTA
GGTCGTGACG TTGCGCTCAA GGTCATGCAC CCCCACCTTG CTGAAGGCAC CCAAGGTGCA
GATTTCATCG CTCGTTTTGA GCGTGAAGCA CAGGCAGCAG CACGCCTCGC CCACCCAGGT
CTCGTCTCTG TTTACGACCA AGGGCATGAC GGCCGCTACG CGTACCTCAC CATGGAACTC
GTTGACGGAG TCACACTACG CTCACTACTC GATTCCGGGC AGGACATCGA CGCTGCCACG
GCACTGGGAA TCACACAATC CATCATCGAA GCGCTCACCG TCGCACACAG CGTGGGAATG
GTTCACCGTG ACATCAAACC AGAAAACGTG TTGGTCTCCA CGCAAGGGTC GGTCAAACTC
ACCGACTTTG GCCTCGCGCG CGCGGTGACG GACATCTCAT CAACTGCCAC AGGGACGTTC
TTTGGGACCG TGGCCTACAT TGGGCCTGAA CTCGTCACTC ATGGACACGC AGATTCGCGC
ACTGACTTGT ATGCCGTAGG CATCATGACT TATGAGCTCC TCACTGGGCG CCAACCGTTC
ACCGCGCAAA CCCCAGTGAA CATCGCCTTC AAACACGTCA ATGACCCCAT GCCTGTCCTC
GTGTCTGCCA AGGGCGAAGC GTTCCCGGCA CAGATCAACA ACTTCATCAC ATCGTTAACA
GCCAAAGACC CAGATGAACG TCCCGCAGAC GCCACCGAGG CACTGACCCT ACTCCGATCT
ACCCTGGCCA ACCTCGCAGG TGAGGACCCG GCAACTTATC ACCGCTCAGC ACTCGAACAG
CGCGATCATC TCGCTGCCCT GGTCACAGGG ACCATGACCG CAGACACCTC ATCAGATCTA
CACACCCCAG CCTCGCCCGC CGAAGCAAGC CACACCCACG TGCTCTCCCC CACGGCGAGT
TCACCCGCAA CTCCCCCCTC ACCAGCACTC TCACCGCCAT CCGCGCCGAC TCCTGAGGGG
TCAACGCAAC TCATCAGTAT GGACGTCAAC GCCACTCGAG CCTTCTCCAC CACACCCCCG
CGCTCACAGG CACGTGCAAC CTCGCCACGC TCTGAGAAGC GATCCCGACG CCGCTCCCCC
CTGAAAACCT TCGTGATCGC CCTGATCGCT GTGGTTCTGC TCAGCGGTGG TGCTGTTGGA
GGGACCTGGT GGTGGAACGA CCATGGACCA GGCTCGTACA CGAGCGTCCC ACAAGTGGCG
GGCATGCCAG AACAAGACCT TGACACGCTC TTTGACCAAC ACCCACTGAC CTACACGGTC
ACTGAAGAAC ACTTTGATGA CGTCCCCAAA GGTGACGTCG CATATTCAGA ACCAGCAAGC
GGCGAACGCG TCAAGAAAGA CAGCGCAATC ACCGTCTTCG TTTCCCTCGG TATCAAAGAA
GTCACAGTGC CAGCCGACCT CACAGGTATC CCCGAGGCAG ACTCCCAGGC GCTACTGACG
AACGCAGGAT TCACCAACCT CACAACAGAA CGCACCTTTG ACACACGCAC AGACAAGGGC
ACTGTCCTAT CAGTGTCTGT TGAAGAGGGA TCGACTCTGC CCCACAACGT GGCGATCACG
CTCACCGTTT CCGACGGTCC GGAACCCATC ACAATCCCGG AAGTCACTGG TCAACCCCTC
AAAGAGGCCA AAAAAACACT TAAAGACCTT GAACTAACAC TCAAAGAGAA CACGGCGCAC
TCGGACACCG TGGCCAAAGG AACAATCATT GACCAGAAAC CAGCGAGTGG CGACTCGGGT
TTCCGGGGAG ATACCGTCAC TGTCACCGTG TCCGCTGGAC CAGAACTCAT CACTGTCCCC
GACGTCACGG GCAAGAAACG TGACGAAGCC GAGCGCATCC TCACAGACGC TGGGTTCACC
GTCGAGACCA AAGAATACCT CGATGGTTTC TTTGGTCTCG TGCGCTTCCA GGACGTCAAT
GCCGGAGAGC AGATCCCCAA AGGCTCAACA GTCACCATCA CGATCTTTTA A
|
|---|
| Protein sequence | MTSQGLDHIV GQLIDNRYRV IARIARGGMA TVYRATDTRL GRDVALKVMH PHLAEGTQGA
DFIARFEREA QAAARLAHPG LVSVYDQGHD GRYAYLTMEL VDGVTLRSLL DSGQDIDAAT
ALGITQSIIE ALTVAHSVGM VHRDIKPENV LVSTQGSVKL TDFGLARAVT DISSTATGTF
FGTVAYIGPE LVTHGHADSR TDLYAVGIMT YELLTGRQPF TAQTPVNIAF KHVNDPMPVL
VSAKGEAFPA QINNFITSLT AKDPDERPAD ATEALTLLRS TLANLAGEDP ATYHRSALEQ
RDHLAALVTG TMTADTSSDL HTPASPAEAS HTHVLSPTAS SPATPPSPAL SPPSAPTPEG
STQLISMDVN ATRAFSTTPP RSQARATSPR SEKRSRRRSP LKTFVIALIA VVLLSGGAVG
GTWWWNDHGP GSYTSVPQVA GMPEQDLDTL FDQHPLTYTV TEEHFDDVPK GDVAYSEPAS
GERVKKDSAI TVFVSLGIKE VTVPADLTGI PEADSQALLT NAGFTNLTTE RTFDTRTDKG
TVLSVSVEEG STLPHNVAIT LTVSDGPEPI TIPEVTGQPL KEAKKTLKDL ELTLKENTAH
SDTVAKGTII DQKPASGDSG FRGDTVTVTV SAGPELITVP DVTGKKRDEA ERILTDAGFT
VETKEYLDGF FGLVRFQDVN AGEQIPKGST VTITIF
|
|---|
| |