| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1345 |
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| Symbol | |
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| ID | 8380522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1438741 |
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| End bp | 1439973 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645004094 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003161304 |
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| Protein GI | 256832577 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAA GTGACATGAA GACGTACACC TACGAGGCTG CTGATAAGTC CGGCAAAATC
GTCAAGGGAA AGATGGAGGC AACCTCAGAA GCTGCGGTTG CTCAACGGCT CATGGCTAAT
GGTGGACAGC CAATGTCCAT CACGCAGGTC AACACCGGTG GACTCAACTC AGAAATCAGT
ATTCCTGGCA TCAGCGACAA GATTTCGCTG AAAGAAATCG CGATCATGTC ACGTCAGCTC
GCGACCATGA TCAACGCTGG CCTATCCCTG CTGCGAGCTC TCACAATCTT GACCGAACAA
ACCGAGAACA AGGTTCTGCA AGGAATCTTG GGGACGGTCC GTTCGGATGT GGAAACCGGT
GGCTCGCTGT CGTCAGCGCT TGCCAAGCAC CCTAAGGTGT TCCCACCTCT CATGATCAAC
ATGGTGCGCG CAGGTGAAAC CGGTGGGTTC CTGGATAAGA CGTTGCTCAG CATCGCCAAG
AACTTTGAAG ACGAAGTGAA GCTTAAGGGC AAAATCAAGT CTGCTATGAC ATACCCGGTC
GTCGTCCTTG TGATTGCAAT TTTGGCGTCC GCTGGAATGT TGATCTTTAT TGTCCCCGTG
TTCGCCGGAA TGTTCGCAAC CCTTGGTGGC GAACTTCCCT TTGTCACACA AATCCTTGTG
ACGATGTCCG ACTTTCTGAA AATGGCGATC TGGCCGATCC TGCTTCTTGT TTTTGCAGGG
TTCATTTGGT GGAACCGCAT TAAGCATCGC AAGTCAGTGC GGGAGAAGGT TGACCCCGTC
AAATTGAAGA TGCCGGTCTT TGGGAAACTT ACGCAAAAAA TCTCGATTGC ACGGTTCACC
CGCAACTTAG GGGCGATGCT CAGCGCAGGT GTCCCCATCT TGCAGGCATT GGAAATCGTG
GGGGAAACAA GCGGGAACAT TGTTGTGGAG CACGCCGCGA ACGATGTGAT TGACAGTGTG
CGTCGAGGGC GGGCCCTGAC TGCTCCGTTG TCGGAAAACC CGGTGTTCCC ACCGATGGTG
GTTCAAATGA TGGCGGTGGG TGAAGACACG GGTGCGCTCG ACGACATGCT GGAGAAGATT
GCCGAGTTCT ACGACGCCGA AGTGGAGGCG ACCACAGAAC AACTCACCAG CCTGATCGAG
CCCCTCATGA TCCTTGTCAT CGGTGGGATC GTCGGCGGTA TGGTCATCGC TCTATACATG
CCAATCTTTT CAATCTTTAA CCTCATTCAG TAG
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| Protein sequence | MAASDMKTYT YEAADKSGKI VKGKMEATSE AAVAQRLMAN GGQPMSITQV NTGGLNSEIS
IPGISDKISL KEIAIMSRQL ATMINAGLSL LRALTILTEQ TENKVLQGIL GTVRSDVETG
GSLSSALAKH PKVFPPLMIN MVRAGETGGF LDKTLLSIAK NFEDEVKLKG KIKSAMTYPV
VVLVIAILAS AGMLIFIVPV FAGMFATLGG ELPFVTQILV TMSDFLKMAI WPILLLVFAG
FIWWNRIKHR KSVREKVDPV KLKMPVFGKL TQKISIARFT RNLGAMLSAG VPILQALEIV
GETSGNIVVE HAANDVIDSV RRGRALTAPL SENPVFPPMV VQMMAVGEDT GALDDMLEKI
AEFYDAEVEA TTEQLTSLIE PLMILVIGGI VGGMVIALYM PIFSIFNLIQ
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