| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1339 |
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| Symbol | |
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| ID | 8380516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1431745 |
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| End bp | 1432806 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645004088 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_003161298 |
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| Protein GI | 256832571 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGAA CATCGACAAT AGGCTTGGAC ATCGGGTCAA CCGCTGTCCG TGCCGCTCAA
CTGGAATTTG GTTCTGGAGG GCCTGGATCA ACACCTCCAA CCTTGAGCGC GTACGCACAA
CTGCCGTTAC CTGCAGGCGT CATGCAGGAC GGGGTTGTTG TGGAACCAGA CAAGGTTGCA
TCTGCCGTCA AAGCTCTGTG GCAAGTGGGG AAGTTCTCCG CCCATGACGT GGTGATGGGT
GTAGGAAACC AGCACGTCAT TGTGCGTGAA GCTGACTTGG CTTGGCAGCC CATGAACGTG
TTGAAGAAAT CATTGCCGTA CCAAGCGCAG GACCTCCTTC CGGTTGCGTC AGGCGATGCG
GTCTTCGATT TTGTTCCAAC CGGTGAGTTC GAGTCTGAAG AGGGCCGACG GATGTCTGGT
CTTCTTGTTG CTGCTATTCG TGACATGGTG TCTGCTAACG TGCGGGCCGC GGAAGCCGGT
GGGGTTCGCC CGCTCATGGT TGACCTCAAT CCGTTGGCGA TCCAACGTGC GCAAACTCAG
GGTGAACTTA AAAAATACAC TGCAGCTTTT GTTGATGTGG GTGCTCGGAT CACCAATGTT
GTCATTGCTG AACGTGGGCT ACCGCGGTTC GTGCGCGTGT TACCGCATGG AAGCCAGGAG
TGTACTGACG CACTCGCGCA TACGATGTCG TCAACAGTTG AGGACGCAGA ACGTATGAAA
CGCGAACTGG GCGTCGGGTA CCCAACAAAT CCAGAACGCC AACCACTCGC CGATGTGATC
ATGAACGTGA CGTCCCAGCT GATCGAGTCC GTCCGTTCTA CCTTCGTGTA CTACGGAATG
AAAAATCTGG GTGCTCCCAT TGACGTTGTG GTCCTCACCG GTGGTGGCGC TCTGCTGAAT
GGTTTTGGTC AGTATCTTTC ATCAGCTGTT CGTCTCCCTG TCCAAATGGG AAATCCTTTT
GACGGTGTCA CTGTCAAAAA GGGTGTCGAC CTTGGTCCTA TTCGTGGCAA CGAACAGGTG
GCAACTGTTG CTCTTGGATT AGCATACGGG GACACAAAAT GA
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| Protein sequence | MARTSTIGLD IGSTAVRAAQ LEFGSGGPGS TPPTLSAYAQ LPLPAGVMQD GVVVEPDKVA
SAVKALWQVG KFSAHDVVMG VGNQHVIVRE ADLAWQPMNV LKKSLPYQAQ DLLPVASGDA
VFDFVPTGEF ESEEGRRMSG LLVAAIRDMV SANVRAAEAG GVRPLMVDLN PLAIQRAQTQ
GELKKYTAAF VDVGARITNV VIAERGLPRF VRVLPHGSQE CTDALAHTMS STVEDAERMK
RELGVGYPTN PERQPLADVI MNVTSQLIES VRSTFVYYGM KNLGAPIDVV VLTGGGALLN
GFGQYLSSAV RLPVQMGNPF DGVTVKKGVD LGPIRGNEQV ATVALGLAYG DTK
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