Gene Jden_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1303 
Symbol 
ID8380480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1396224 
End bp1397225 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content56% 
IMG OID645004052 
Productprotein of unknown function DUF881 
Protein accessionYP_003161262 
Protein GI256832535 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.412447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.898355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC CCTCATCAAC ACCACCCACG CCGCAGTCTC CACCGGAATG CGAGACAGTC 
ACGGACGCAC CTGACCAGTT ACACGACGAA GTAGCCATAC CGTCTGCTCA GGCGGCAGCT
GGGTCCGCAA GCGACCAGGA GACCACACCA TCTGACCAGA CGACAGCCAC ATTCGCTGAT
GACCACACCG AACCGGACCC CTTGAATTCG AAGGCACCAG AGTTAGAGGA CCCGGAGCGA
GAAGACGCTT CGGAAAGTCC GCCAACCGCG CCAGCGCCGC CGGTGAGTCA AAAGAGGGCG
TTGATCCGGC TTTTGCAGCC GCGAGCAACA CGCGCCCAGT TTCTCTCCGC TGCACTGTTG
GGGTTGCTGG GATTTGCTCT CGTTGTGCAA CTACAAGTGC AACAGCAAGA TGAACTGGCA
ACGCTTCGAG AAAGCGACCT TGTCAACCTG CTTGATGACG TCACACGCAG GAACTCCGAT
CTGGAAGACG ACATCGTTCG GCTTAGAGCG TTGGAAAGTG AACTGCGATC TGGTTCTTCC
AGCCAGCGTG CCGCAATCGA AGCGGCACGG GAGAATGTGA CGACTCAAGG TATCTTGGCA
GGTCGTTTAC CAGCACAGGG ACCAGGAGTC ACCATTCTCT TGACAGATGG TGACGAGCGT
TTGCCCGCCG CGACGTTATT CAACGTGCTA GAAGAGTTAC GCAACGCTGG AGCAGAAGTC
ATTGAAATTA ATGGGATTCG TCTCGTCACT GACAGCTATT TTATTGATGA CACCCAAGGG
GTCGAGGTTG ACGGAACGGT CATCACCGAG CCCTATATTT GGAAGGCAAT CGGTGCCCCT
GACACCCTTG TTCCAGCCCT AGAAATCCCG GGCGGTGCCA TGGCCTCTGT TCGATCTCGA
GGGGGACAAG CCACCATCAC GGAAGCAGAA TCGGTGCTCA TCGAGGCTGT TGTCGAACCC
GAAATACCAG AATATGCGCA GGCCACGCCC AAAAACGATT AA
 
Protein sequence
MTTPSSTPPT PQSPPECETV TDAPDQLHDE VAIPSAQAAA GSASDQETTP SDQTTATFAD 
DHTEPDPLNS KAPELEDPER EDASESPPTA PAPPVSQKRA LIRLLQPRAT RAQFLSAALL
GLLGFALVVQ LQVQQQDELA TLRESDLVNL LDDVTRRNSD LEDDIVRLRA LESELRSGSS
SQRAAIEAAR ENVTTQGILA GRLPAQGPGV TILLTDGDER LPAATLFNVL EELRNAGAEV
IEINGIRLVT DSYFIDDTQG VEVDGTVITE PYIWKAIGAP DTLVPALEIP GGAMASVRSR
GGQATITEAE SVLIEAVVEP EIPEYAQATP KND