Gene Jden_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1262 
Symbol 
ID8380439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1352306 
End bp1353847 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content58% 
IMG OID645004010 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_003161221 
Protein GI256832494 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCCAG TTGCCTCAAC GACCCGGCAA AACCCGCTCC GCGATCCACG CGATCAACGA 
CTCCTGCGCA TCGCAGGCCC GTGTGGCATC GTCATCTTCG GGGTCACCGG TGATCTCGCA
CGCAAAAAGC TCATCCCCGC GATCTACGAC CTTGCCAACC GAGGGTTACT GCCCCCCGGA
TTTGCGCTCA CCGGCTTTGG CCGACGTGAC TGGTCCCATC AAGACTTCGC CCACTATGCG
CGTGAGGCAG TCAAACAGTT CGCACGGACT CCTTTCAAAC AAGCTGTCTG GGATGAGCTG
GTTGACGGCA TTCGCTTTGT TCAAGGGACT TTCAACGACA CAGACGCGTT CATGAGACTC
AATGACACCG TCAAAGAACT CGACGAACAG CGCGGCACTG GGGGTAACCA CGCTTTCTAC
CTGTCTGTTC CGCCATCAGC ATTCCCCTTG GTGTGCCGAC AGCTAGCAGA ATGCGGTCTC
TCCCAATCTG AAGAAGATGC CTGGCGTCGA GTCGTGATCG AAAAACCATT TGGACACGAC
CTTGAGTCAG CACAGGAACT CAACAACGTT GTCTCAGAAG TGTTCCCCGC CGAAGACGTC
TTTCGTATTG ACCACTATCT CGGTAAAGAA ACAGTCCAGA ACATTCTTGC CTTGCGGTTC
GCAAACCAAA TGTATGAACC AATCTGGAAT TCCCACTACG TCGACCACGT GCAAATCACG
ATGGCTGAAG ACATCGGAAT CGGGTCGCGC GCTGGGTACT ACGACGGCAT CGGAGCTGCC
CGAGACGTCA TTCAAAACCA CCTGTTGCAA CTGCTCGCAC TCACCGCAAT GGAAGAACCT
GCTTCCTTCT CCGCCCGCGA TCTCATCGCC GAAAAAATCA AGGTCCTTGC CGCAACCCGG
GTCCCTGACG ACATCGATGC GCACACAGCA CGAGGACAAT ACACTGCAGG CTGGCAGGGC
GGCGAAAAGG TCAATGGGTT CTTCGAAGAA GACGGCATCC CCGCCGACTC GGTCACGGAA
ACTTTCGCCG CTATCCGCGT TGACATCGAC AACCGTCGCT GGGCTGGTGT GCCCTTCTAC
TTACGTGCCG GGAAACGCCT TGGCCGGCGT GTGACAGAGA TTGCGATTGT GTTCAAGAAG
GCGCCGCATC TGCCTTTTGA GTCCACCGCA ACAACCAAAC TCGGTGAGAA TGCCCTGGTG
ATTCGTGTCC AACCAGATGA GGGAGTCACC ATGCGGATCG GGGCGAAGGT CCCCGGAACG
CAAATGGAAA TTCGCGATGT GACCATGGAC TTCGGTTATG GACACGCGTT CACCCAGTCC
TCCCCTGAAG CGTACGAACG CCTCATCCTT GATGTCCTCC TCGGTGAGCC TCCGCTCTTC
CCTCGGCACG AGGAAGTGGA GTTGTCGTGG CGGATCCTTG ACCCCATCAC GGCACACTGG
GCTCAGCACG GTTCCCCCGC ACCTTACCGT GCAGGAACGT GGGGACCTGA CACTGCCGAT
GAGATGCTCA AGCGCGATGG CCGCGCCTGG CGCCGCCCGT AA
 
Protein sequence
MQPVASTTRQ NPLRDPRDQR LLRIAGPCGI VIFGVTGDLA RKKLIPAIYD LANRGLLPPG 
FALTGFGRRD WSHQDFAHYA REAVKQFART PFKQAVWDEL VDGIRFVQGT FNDTDAFMRL
NDTVKELDEQ RGTGGNHAFY LSVPPSAFPL VCRQLAECGL SQSEEDAWRR VVIEKPFGHD
LESAQELNNV VSEVFPAEDV FRIDHYLGKE TVQNILALRF ANQMYEPIWN SHYVDHVQIT
MAEDIGIGSR AGYYDGIGAA RDVIQNHLLQ LLALTAMEEP ASFSARDLIA EKIKVLAATR
VPDDIDAHTA RGQYTAGWQG GEKVNGFFEE DGIPADSVTE TFAAIRVDID NRRWAGVPFY
LRAGKRLGRR VTEIAIVFKK APHLPFESTA TTKLGENALV IRVQPDEGVT MRIGAKVPGT
QMEIRDVTMD FGYGHAFTQS SPEAYERLIL DVLLGEPPLF PRHEEVELSW RILDPITAHW
AQHGSPAPYR AGTWGPDTAD EMLKRDGRAW RRP