| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1252 |
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| Symbol | |
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| ID | 8380429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1341702 |
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| End bp | 1343645 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004000 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003161211 |
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| Protein GI | 256832484 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC CAACCACCTA TCGCCCTGCA CCTGGTGATA TCCCCACCGC CCCAGGTGTC
TACCGATTTC GCGATGATCA GGGCCGCGTC ATCTATGTAG GTAAAGCAAA GAACCTGCGC
GCCCGCCTAT CGAACTACTT CCAATCACTC AGTGCCCTGC ACCCGCGAAC TCAAGCGATG
GTCACCTCAG CTGCCGGAGT TGAGTGGACT ATCGTGTCAA CCGAAGTCGA AGCACTCGCA
CTGGAATACA CCTGGATCAA AGAGTACGAC CCACGATTCA ACGTAAAATA TCGTGACGAC
AAGTCATACC CCTACCTGGC AGTGAGCATG TCACAGCAAG TTCCGCGTGC GTTTGTGACA
CGCTCGGCGA AGAAACCCGG TGACCGATAC TTTGGTCCTT TTGGCCACGC ATGGGCCATC
AGAGATACCC TTGACCAGCT ATTGCGGGTA TTCCCGGTGC GTACTTGTAC ACAAGGTGTC
TACAACCGTG CGCAACGATC CGGGCGTCCT TGTCTGTTGG GGTACATCGA CAAATGCTCC
GCACCGTGCA CAGGCAACAT ATCTCAGGAC GATCACCGGC AACTCGCAGA AGATCTGTGC
GACTTTATGG CCGGACACAC TGGTCGTTTC ATCTCTGATG TCAAACAGCG CATGATGGAC
GCCTCTCAAG CGCTCGACTT TGAAACTGCT GCCCGGTTAC GTGACGATCT GCGTGCCTTG
GAAAGGGCAT TGGAAAAGAA CGCGGTGGTG TTATCTGATG CAACTGACGC TGATGTCTTT
GCGGTCGCAT CAGATGAACT GGAAGCAGCA GTGCAAGTGT TCCATGTCAG GGGCGGCCGT
ATCAGAGGGC AACGCGGGTG GATCGCGGAA AAAGTGGAAG CGCTTCGCGA CGACGAGTTT
ATTGAGCATC TCCTTCAACA GGTGTACGGC GTCCACGATG ACTCTGTAAC TCCAGGTCAT
GCCGCCCAAG CGATCCCACG CCAAGTTCTA GTTCCCGTCC TCCCTGCGGA TTCAGAGACG
ATGACAGCCT GGCTCAGCAC ACTGCGTGGG AGCAAAGTCG CTGTGCGGAT ACCGCAGCGC
GGCGAAAAAG CGCAGCTGGC TGCAACAGTT CACGCGAACG CAGAGCAAGC GTTACGCCTC
CACAAATCCC GGCGTGCTGG GGATCTCACC ACCCGCTCTC AAGCGTTACG CGAACTCCAT
GACGCTCTGG AACTCAGTGA AGCCCCGCTA CGCATTGAAT GTTACGACGT CTCCCACAAC
CAAGGCACGT TCCAAACAGC ATCCATGGTC GTCTTCGAGG ACGGCCTCCC CAAGAAAAGC
GCTTACCGAC TTTTCCATAT CAAAGGAAAC GAAGGAGACG GGGCGCGGGA TGACACTGAA
GCAATGTATG AAGTGATCTC CCGGAGATTC AAACGCCACC TCATACACAA AGAAACCCGG
CAGACAGTCA CCACTGGTGA AGTCGACGCA CACGACAACT CCAGTGAAAG CCCAGTGTTC
GCTTACGAAC CGTCACTCGT TGTCGTTGAT GGTGGCGCAC CGCAGGTTGC AGCGGCTGTC
CGGGCGCTGA CCGACCTGGG AATCACCGAC GTCGCGGTGT GCGGGCTCGC GAAACGGCTG
GAAGAAATTT GGATACCACA TGACGAGTTC CCTGTCATTC TTGAACGTCA ATCCGCAGGA
CTGTATTTGC TCCAACACCT GCGCGACGAA GCGCATCGCT TTGCAATTAA GGCACATCGA
AAGCGCCGTT CCCAGGGAAT GACAGTTTCC CAGCTTGACG GCATACCTGG TCTTGGGCCA
ACCCGTGTGA AGGCCTTGCT CAACCACTTT GGTTCAGTGA AAAAAATCAA AGAAGCGTCA
GTGGACGACA TCGCAGCAGT GAAAGGGATC GGACGAACGA CGGCGACACA AGTTGTTGAG
TTCCTTCATC CACGCGCAGA GTAA
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| Protein sequence | MADPTTYRPA PGDIPTAPGV YRFRDDQGRV IYVGKAKNLR ARLSNYFQSL SALHPRTQAM
VTSAAGVEWT IVSTEVEALA LEYTWIKEYD PRFNVKYRDD KSYPYLAVSM SQQVPRAFVT
RSAKKPGDRY FGPFGHAWAI RDTLDQLLRV FPVRTCTQGV YNRAQRSGRP CLLGYIDKCS
APCTGNISQD DHRQLAEDLC DFMAGHTGRF ISDVKQRMMD ASQALDFETA ARLRDDLRAL
ERALEKNAVV LSDATDADVF AVASDELEAA VQVFHVRGGR IRGQRGWIAE KVEALRDDEF
IEHLLQQVYG VHDDSVTPGH AAQAIPRQVL VPVLPADSET MTAWLSTLRG SKVAVRIPQR
GEKAQLAATV HANAEQALRL HKSRRAGDLT TRSQALRELH DALELSEAPL RIECYDVSHN
QGTFQTASMV VFEDGLPKKS AYRLFHIKGN EGDGARDDTE AMYEVISRRF KRHLIHKETR
QTVTTGEVDA HDNSSESPVF AYEPSLVVVD GGAPQVAAAV RALTDLGITD VAVCGLAKRL
EEIWIPHDEF PVILERQSAG LYLLQHLRDE AHRFAIKAHR KRRSQGMTVS QLDGIPGLGP
TRVKALLNHF GSVKKIKEAS VDDIAAVKGI GRTTATQVVE FLHPRAE
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