Gene Jden_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1138 
Symbol 
ID8380315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1219109 
End bp1220044 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content59% 
IMG OID645003883 
ProductABC transporter related 
Protein accessionYP_003161097 
Protein GI256832370 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.129025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGAC ACCACGACGA CTCCGCCCCA GCGCTCGAAC TCCACCGGGT GACAAAAAGG 
TACAACGGCT CCCCCGTTGT CAATGACCTG ACACTGATGG CTCAACGTGG GCACGTCACT
GCAGTTCTGG GCCCAAACGG TGCCGGTAAA ACAACAACGA TTGAAATGTG CGAAGGACTA
CGAACACCTG ACCACGGTGA TATTCGAGTC CTTGGCCTGC GCCCGCGTGA GGATCGCAGC
GTCCTGCGCG AACAAGTCGG TGTGATGCTT CAAGATGGAG GTTTACCTAC CTCGGTAAAC
GGGCACACTC TCCTCACCCA TGTTTCTCGT TTTTACGCGG ACCCTTGGCC GGTTCACGAC
CTCGTCGAAC GCCTTGGCCT TGCCTCGTTC TTCACCACAT CTGTGCGGCG CCTCTCTGGT
GGGCAGCGTC AACGCATCGC ATTAGCTGCC GCGCTCCTTG GTCGCCCACA GCTTGTCTTC
CTCGACGAAC CAAGCGCCGG GCTTGACCCG CAATCTCGGC ATGCGGTGTG GGACTTGATC
CGCGCCCTAC GCGAACAAGG CACCTCCGTA CTCCTGACCA CACACCTCAT GGATGAAGCA
GAAGCACTCT CTGACCACGT AGTCATTATG GATCATGGAA CAGTGATCGC CCAGGGCAGC
CCCACCCAAC TCACCGCCCA CGACGCATCA ACAATCACGT TCACCACAGC AACCCCGCTC
GACACCACCG TGCTCCACGC GGATACGCAG ATCACAGCTC GCCCGCACCC CACGCTCCCC
GCAACATGGA CTATTTCTCA GGGTGCATCA GCACAGACAC TTGCCGCACT CGCGCAATGG
TGTGCTGACC GCGGTGTCAC CCTCACCTCA ACCACGCTGG GCAAACGAAC ACTTGAAGAT
GTGTTCCTCG ACATCACAGG ACGTCACCTC AGATGA
 
Protein sequence
MPRHHDDSAP ALELHRVTKR YNGSPVVNDL TLMAQRGHVT AVLGPNGAGK TTTIEMCEGL 
RTPDHGDIRV LGLRPREDRS VLREQVGVML QDGGLPTSVN GHTLLTHVSR FYADPWPVHD
LVERLGLASF FTTSVRRLSG GQRQRIALAA ALLGRPQLVF LDEPSAGLDP QSRHAVWDLI
RALREQGTSV LLTTHLMDEA EALSDHVVIM DHGTVIAQGS PTQLTAHDAS TITFTTATPL
DTTVLHADTQ ITARPHPTLP ATWTISQGAS AQTLAALAQW CADRGVTLTS TTLGKRTLED
VFLDITGRHL R