Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1138 |
Symbol | |
ID | 8380315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1219109 |
End bp | 1220044 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645003883 |
Product | ABC transporter related |
Protein accession | YP_003161097 |
Protein GI | 256832370 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.129025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCGAC ACCACGACGA CTCCGCCCCA GCGCTCGAAC TCCACCGGGT GACAAAAAGG TACAACGGCT CCCCCGTTGT CAATGACCTG ACACTGATGG CTCAACGTGG GCACGTCACT GCAGTTCTGG GCCCAAACGG TGCCGGTAAA ACAACAACGA TTGAAATGTG CGAAGGACTA CGAACACCTG ACCACGGTGA TATTCGAGTC CTTGGCCTGC GCCCGCGTGA GGATCGCAGC GTCCTGCGCG AACAAGTCGG TGTGATGCTT CAAGATGGAG GTTTACCTAC CTCGGTAAAC GGGCACACTC TCCTCACCCA TGTTTCTCGT TTTTACGCGG ACCCTTGGCC GGTTCACGAC CTCGTCGAAC GCCTTGGCCT TGCCTCGTTC TTCACCACAT CTGTGCGGCG CCTCTCTGGT GGGCAGCGTC AACGCATCGC ATTAGCTGCC GCGCTCCTTG GTCGCCCACA GCTTGTCTTC CTCGACGAAC CAAGCGCCGG GCTTGACCCG CAATCTCGGC ATGCGGTGTG GGACTTGATC CGCGCCCTAC GCGAACAAGG CACCTCCGTA CTCCTGACCA CACACCTCAT GGATGAAGCA GAAGCACTCT CTGACCACGT AGTCATTATG GATCATGGAA CAGTGATCGC CCAGGGCAGC CCCACCCAAC TCACCGCCCA CGACGCATCA ACAATCACGT TCACCACAGC AACCCCGCTC GACACCACCG TGCTCCACGC GGATACGCAG ATCACAGCTC GCCCGCACCC CACGCTCCCC GCAACATGGA CTATTTCTCA GGGTGCATCA GCACAGACAC TTGCCGCACT CGCGCAATGG TGTGCTGACC GCGGTGTCAC CCTCACCTCA ACCACGCTGG GCAAACGAAC ACTTGAAGAT GTGTTCCTCG ACATCACAGG ACGTCACCTC AGATGA
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Protein sequence | MPRHHDDSAP ALELHRVTKR YNGSPVVNDL TLMAQRGHVT AVLGPNGAGK TTTIEMCEGL RTPDHGDIRV LGLRPREDRS VLREQVGVML QDGGLPTSVN GHTLLTHVSR FYADPWPVHD LVERLGLASF FTTSVRRLSG GQRQRIALAA ALLGRPQLVF LDEPSAGLDP QSRHAVWDLI RALREQGTSV LLTTHLMDEA EALSDHVVIM DHGTVIAQGS PTQLTAHDAS TITFTTATPL DTTVLHADTQ ITARPHPTLP ATWTISQGAS AQTLAALAQW CADRGVTLTS TTLGKRTLED VFLDITGRHL R
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