Gene Jden_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1112 
Symbol 
ID8380289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1183176 
End bp1184342 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content61% 
IMG OID645003853 
Productarginine biosynthesis bifunctional protein ArgJ 
Protein accessionYP_003161071 
Protein GI256832344 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.423165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.566416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA CCCACCCCAA AGGCTTTGTC GCCGCAGGTG TCGCTGCTGG ACTGAAAACA 
AGTGGTAACA AGGATGTGGC ACTCGTCGTC AACACCGGCC CCCGTGACAC AGCCGCAGCC
GTCTTTACCA GTAACCGCAT CCAAGCTGCC CCGATCACGT GGAGTAAACA AGCAATCGCC
GACGGACAAG TACGCGCCGT TGTCCTCAAC TCAGGGGGCG CGAACGCATG CACCGGCCCT
GAAGGGTTTG CTGACACTCA CCACACCGCT GAACACGTAG CGAAACTACT GGGGACCTCA
TCTGGAGATG TTCTTGTCTG CTCCACCGGG CTGATCGGTG AACGACTCAA CATGCCTGCG
CTCACTGCCG GGATCACCGA CGCCGCCACC CACCTCAGCG ACACAGGCGG CCCCGATGCG
GCTCATGCCA TCATGACCAC AGACTCCGTG GCCAAAATGG CCACCCACAA CGCCCACGGA
TGGTCAGTGG GTGGCATGGC AAAAGGGGCC GGGATGCTCG CCCCCGCACT AGCCACAATG
CTCTGCGTGA TCACCACCGA CGCTGACATC GCCCCAGAAA CAGCGCAACG GGCCCTCGCC
CAAGCCACCT CCACCACGTT TGACCGGATC GACTCTGACG GCTGTATGTC GACGAACGAC
ACGGTCATCC TGCTCGCCTC CGGTGCATCG GGTATCACAC CCACAGAAGC TGAGTTCACC
ACCGCGATCA CCGCAGTTGC CAAAGACCTC TCCAGAGCCC TCATCAACGA TGCTGAAGGG
GCCAGTCATG ACATCGCTGT CACCGTCACT CACGCCACCA GCGAAGACGC AGCGCTCGCA
GTCGCCCGAT CCATCACCCG CTCCAACCTC GTCAAAACTG CGATCTTTGG CAACGACCCC
AACTGGGGTC GTGTCCTCGC CTCATTAGGA ACGGTTCCCA CACATGTTGC TCCCTACGAA
CCCGATGCCA TCGACGTCAC CATCAACGGC GTGACCGTCT GTCGCAACGG GGGAGTCGGG
GACGACCGAA CCCTGGTCAA CCTTGCCGCC CACCGCGATG TGCACATCGT TGTCAACCTC
AACGCAGGAG ATCATCCGCC CGTCACCGTG TGGACCAACG ATCTCACCCA CGATTACGTC
CACGAGAACA GCGCCTACTC AACATGA
 
Protein sequence
MSVTHPKGFV AAGVAAGLKT SGNKDVALVV NTGPRDTAAA VFTSNRIQAA PITWSKQAIA 
DGQVRAVVLN SGGANACTGP EGFADTHHTA EHVAKLLGTS SGDVLVCSTG LIGERLNMPA
LTAGITDAAT HLSDTGGPDA AHAIMTTDSV AKMATHNAHG WSVGGMAKGA GMLAPALATM
LCVITTDADI APETAQRALA QATSTTFDRI DSDGCMSTND TVILLASGAS GITPTEAEFT
TAITAVAKDL SRALINDAEG ASHDIAVTVT HATSEDAALA VARSITRSNL VKTAIFGNDP
NWGRVLASLG TVPTHVAPYE PDAIDVTING VTVCRNGGVG DDRTLVNLAA HRDVHIVVNL
NAGDHPPVTV WTNDLTHDYV HENSAYST